2023 to date (382 papers)

• IFNL4 Genotypes and Risk of Childhood Burkitt Lymphoma in East Africa  Baker, FS; Wang, J; Florez-Vargas, O et al. J Interferon Cytokine Res, DOI://10.1089/jir.2023.0014 (2023)
• HLA in isolated REM sleep behavior disorder and Lewy body dementia  Yu, E; Krohn, L; Ruskey, JA et al. Ann Clin Transl Neurol, DOI://10.1002/acn3.51841 (2023)
• Loss of CD4+ T cell-intrinsic arginase 1 accelerates Th1 response kinetics and reduces lung pathology during influenza infection  West, EE; Merle, NS; Kamiński, MM et al. Immunity, DOI://10.1016/j.immuni.2023.07.014 (2023)
• Transcription factor EGR2 controls homing and pathogenicity of TH17 cells in the central nervous system  Gao, Y; Wang, Y; Chauss, D et al. Nat Immunol, DOI://10.1038/s41590-023-01553-7 (2023)

• Chromatin remodeling of prostaglandin signaling in smooth muscle enables mouse embryo passage through the female reproductive tract  Xin, Q; Yu, G; Feng, I; Dean, J; , Dev Cell, DOI://10.1016/j.devcel.2023.08.025 (2023)
• Comparative Evaluation of Current Biochemical-, Sequencing-, and Proteomic-Based Identification Methods for the Streptococcus bovis Group  Putnam, NE; Youn, JH; Wallace, MA et al. J Clin Microbiol, DOI://10.1128/jcm.01712-22 (2023)
• An Artificial Intelligence Approach for Tackling Conformational Energy Uncertainties in Chiroptical Spectroscopies  Marton, G; Koenis, MAJ; Liu, HB et al. Angew Chem Int Ed Engl, DOI://10.1002/anie.202307053 (2023)
• Cannabinoformins: Designing Biguanide-Embedded, Orally Available, Peripherally Selective Cannabinoid-1 Receptor Antagonists for Metabolic Syndrome Disorders  Dvorácskó, S; Herrerias, A; Oliverio, A et al. J Med Chem, DOI://10.1021/acs.jmedchem.3c00599 (2023)
• Using patient-derived tumor organoids from common epithelial cancers to analyze personalized T-cell responses to neoantigens  Parikh, AY; Masi, R; Gasmi, B et al. Cancer Immunol Immunother, DOI://10.1007/s00262-023-03476-6 (2023)
• Designed nanoparticles elicit cross-reactive antibody responses to conserved influenza virus hemagglutinin stem epitopes  McCraw, DM; Myers, ML; Gulati, NM et al. PLoS Pathog, DOI://10.1371/journal.ppat.1011514 (2023)
• HIV-1 neutralizing antibodies elicited in humans by a prefusion-stabilized envelope trimer form a reproducible class targeting fusion peptide  Wang, S; Matassoli, F; Zhang, B et al. Cell Rep, DOI://10.1016/j.celrep.2023.112755 (2023)
• Absence of TRIC-B from type XIV Osteogenesis Imperfecta osteoblasts alters cell adhesion and mitochondrial function - A multi-omics study  Jovanovic, M; Mitra, A; Besio, R et al. Matrix Biol, DOI://10.1016/j.matbio.2023.06.004 (2023)
• Highly pathogenic avian influenza A (H5N1) in marine mammals and seabirds in Peru  Leguia, M; Garcia-Glaessner, A; Muñoz-Saavedra, B et al. Nat Commun, DOI://10.1038/s41467-023-41182-0 (2023)
• Evaluating the Cysteine-Rich and Catalytic Subdomains of Human Tyrosinase and OCA1-Related Mutants Using 1 μs Molecular Dynamics Simulation  Woods, T; Sergeev, YV; , Int J Mol Sci, DOI://10.3390/ijms241713032 (2023)
• Sarcopenia and gut microbiota alterations in patients with hematological diseases before and after hematopoietic stem cell transplantation  Wang, B; Hu, W; Zhang, X et al. Chin J Cancer Res, DOI://10.21147/j.issn.1000-9604.2023.04.05 (2023)
• Accelerated evolution of SARS-CoV-2 in free-ranging white-tailed deer  McBride, DS; Garushyants, SK; Franks, J et al. Nat Commun, DOI://10.1038/s41467-023-40706-y (2023)

• Evolutionary selection of proteins with two folds  Schafer, JW; Porter, LL; , Nat Commun, DOI://10.1038/s41467-023-41237-2 (2023)
• Atypical neurofibromatous lesions: Epigenetic cousins of other benign peripheral nerve sheath tumors?  Ida, CM; Aldape, K; , Neuro Oncol, DOI://10.1093/neuonc/noad083 (2023)
• A brain specific alternatively spliced isoform of nonmuscle myosin IIA lacks its mechanoenzymatic activities  Das, S; Mallick, D; Sarkar, S et al. J Biol Chem, DOI://10.1016/j.jbc.2023.105143 (2023)
• Aire drives steroid hormone biosynthesis by medullary thymic epithelial cells  Taves, MD; Donahue, KM; Bian, J et al. Sci Immunol, DOI://10.1126/sciimmunol.abo7975 (2023)
• Vaccine elicitation and structural basis for antibody protection against alphaviruses  Sutton, MS; Pletnev, S; Callahan, V et al. Cell, DOI://10.1016/j.cell.2023.05.019 (2023)
• Upregulation of Somatostatin Receptor Type 2 Improves 177Lu-DOTATATE Therapy in Receptor-Deficient Pancreatic Neuroendocrine Tumor Model  Sharma, R; Earla, B; Baidoo, KE et al. Mol Cancer Ther, DOI://10.1158/1535-7163.MCT-22-0798 (2023)
• Opioid receptor antagonism and neural response to monetary rewards: Pilot studies in light and heavy alcohol users  Gowin, JL; Sloan, ME; Kirk-Provencher, KT et al. J Psychopharmacol, DOI://10.1177/02698811231191707 (2023)
• Development of a bicistronic anti-CD19/CD20 CAR construct including abrogation of unexpected nucleic acid sequence deletions  Lam, N; Finney, R; Yang, S et al. Mol Ther Oncolytics, DOI://10.1016/j.omto.2023.07.001 (2023)
• OPA1 helical structures give perspective to mitochondrial dysfunction  Nyenhuis, SB; Wu, X; Strub, MP et al. Nature, DOI://10.1038/s41586-023-06462-1 (2023)
• The Molecular Mechanism of Positive Allosteric Modulation at the Dopamine D1 Receptor  Goldberg, A; Xie, B; Shi, L; , Int J Mol Sci, DOI://10.3390/ijms241612848 (2023)
• Membrane free-energy landscapes derived from atomistic dynamics explain nonuniversal cholesterol-induced stiffening  Fiorin, G; Forrest, LR; Faraldo-Gómez, JD; , PNAS Nexus, DOI://10.1093/pnasnexus/pgad269 (2023)
• Optimizing TMS Coil Placement Approaches for Targeting the Dorsolateral Prefrontal Cortex in Depressed Adolescents: An Electric Field Modeling Study  Deng, ZD; Robins, PL; Dannhauer, M et al. Biomedicines, DOI://10.3390/biomedicines11082320 (2023)

• Intestinal microbiome and metabolome signatures in patients with chronic granulomatous disease  Chandrasekaran, P; Han, Y; Zerbe, CS et al. J Allergy Clin Immunol, DOI://10.1016/j.jaci.2023.07.022 (2023)
• Macrophage-mediated extracellular matrix remodeling controls host Staphylococcus aureus susceptibility in the skin  Voisin, B; Nadella, V; Doebel, T et al. Immunity, DOI://10.1016/j.immuni.2023.06.006 (2023)
• Genotype-Phenotype Association in ABCA4-Associated Retinopathy  Pfau, M; Zein, WM; Huryn, LA et al. Adv Exp Med Biol, DOI://10.1007/978-3-031-27681-1_42 (2023)
• Mechanisms of HIV-1 integrase resistance to dolutegravir and potent inhibition of drug-resistant variants  Li, M; Oliveira Passos, D; Shan, Z et al. Sci Adv, DOI://10.1126/sciadv.adg5953 (2023)
• Dorsal visual stream and LIMK1: hemideletion, haplotype, and enduring effects in children with Williams syndrome  Kippenhan, JS; Gregory, MD; Nash, T et al. J Neurodev Disord, DOI://10.1186/s11689-023-09493-x (2023)
• Time-Distributed Framework for 3D Reconstruction Integrating Fringe Projection with Deep Learning  Nguyen, AH; Wang, Z; , Sensors (Basel), DOI://10.3390/s23167284 (2023)
• Tumor-associated macrophages trigger MAIT cell dysfunction at the HCC invasive margin  Ruf, B; Bruhns, M; Babaei, S et al. Cell, DOI://10.1016/j.cell.2023.07.026 (2023)
• Optimizing treatment allocation in randomized clinical trials by leveraging baseline covariates  Zhang, W; Zhang, Z; Liu, A; , Biometrics, DOI://10.1111/biom.13914 (2023)
• Germline Exome Sequencing for Men with Testicular Germ Cell Tumor Reveals Coding Defects in Chromosomal Segregation and Protein-targeting Genes  Pyle, LC; Kim, J; Bradfield, J et al. Eur Urol, DOI://10.1016/j.eururo.2023.05.008 (2023)
• Design of cell-type-specific hyperstable IL-4 mimetics via modular de novo scaffolds  Yang, H; Ulge, UY; Quijano-Rubio, A et al. Nat Chem Biol, DOI://10.1038/s41589-023-01313-6 (2023)
• Fluid protein fold space and its implications  Porter, LL Bioessays, DOI://10.1002/bies.202300057 (2023)
• Evidence for virus-mediated oncogenesis in bladder cancers arising in solid organ transplant recipients  Starrett, GJ; Yu, K; Golubeva, Y et al. Elife, DOI://10.7554/eLife.82690 (2023)
• Bacterial NLR-related proteins protect against phage  Kibby, EM; Conte, AN; Burroughs, AM et al. Cell, DOI://10.1016/j.cell.2023.04.015 (2023)
• Nonlinear expression patterns and multiple shifts in gene network interactions underlie robust phenotypic change in Drosophila melanogaster selected for night sleep duration  Souto-Maior, C; Serrano Negron, YL; Harbison, ST; , PLoS Comput Biol, DOI://10.1371/journal.pcbi.1011389 (2023)
• Characterization of leukemia progression in the Cbfb-MYH11 knockin mice by single cell RNA sequencing  Diemer, JL; Yu, K; Kelly, M et al. Leukemia, DOI://10.1038/s41375-023-01926-9 (2023)
• B cell depletion therapy does not resolve chronic active multiple sclerosis lesions  Maggi, P; Bulcke, CV; Pedrini, E et al. EBioMedicine, DOI://10.1016/j.ebiom.2023.104701 (2023)
• Cell-specific and shared regulatory elements control a multigene locus active in mammary and salivary glands  Lee, HK; Willi, M; Liu, C; Hennighausen, L; , Nat Commun, DOI://10.1038/s41467-023-40712-0 (2023)
• Single-cell transcriptomic analysis of the identity and function of fibro/adipogenic progenitors in healthy and dystrophic muscle  Uapinyoying, P; Hogarth, M; Battacharya, S et al. iScience, DOI://10.1016/j.isci.2023.107479 (2023)

• Identification of eight novel proteasome variants in five unrelated cases of proteasome-associated autoinflammatory syndromes (PRAAS)  Papendorf, JJ; Ebstein, F; Alehashemi, S et al. Front Immunol, DOI://10.3389/fimmu.2023.1190104 (2023)
• Single-Cell Analysis of CX3CR1+ Cells Reveals a Pathogenic Role for BIRC5+ Myeloid Proliferating Cells Driven by Staphylococcus aureus Leukotoxins  Loredan, DG; Devlin, JC; Lacey, KA et al. J Immunol, DOI://10.4049/jimmunol.2300166 (2023)
• A novel ARPKD mouse model with near-complete deletion of the Polycystic Kidney and Hepatic Disease 1 (Pkhd1) genomic locus presents with multiple phenotypes but not renal cysts  Ishimoto, Y; Menezes, LF; Zhou, F et al. Kidney Int, DOI://10.1016/j.kint.2023.05.027 (2023)
• Pacak-Zhuang syndrome: a model providing new insights into tumor syndromes  Rosenblum, JS; Wang, H; Nazari, MA et al. Endocr Relat Cancer, DOI://10.1530/ERC-23-0050 (2023)
• Associations of Circulating Estrogens and Estrogen Metabolites with Fecal and Oral Microbiome in Postmenopausal Women in the Ghana Breast Health Study  Wu, Z; Pfeiffer, RM; Byrd, DA et al. Microbiol Spectr, DOI://10.1128/spectrum.01572-23 (2023)
• Natural History of Visual Dysfunction in ABCA4 Retinopathy and Its Genetic Correlates  Pfau, M; Huryn, LA; Boyle, MP et al. Am J Ophthalmol, DOI://10.1016/j.ajo.2023.05.014 (2023)

• The Vaginal Microbiota of Pregnant Women Varies with Gestational Age, Maternal Age, and Parity  Romero, R; Theis, KR; Gomez-Lopez, N et al. Microbiol Spectr, DOI://10.1128/spectrum.03429-22 (2023)
• Experimental NOE, Chemical Shift, and Proline Isomerization Data Provide Detailed Insights into Amelotin Oligomerization  Chiliveri, SC; Shen, Y; Baber, JL et al. J Am Chem Soc, DOI://10.1021/jacs.3c05710 (2023)
• Multiomics Analyses Reveal Sex Differences in Mouse Renal Proximal Subsegments  Chen, L; Chou, CL; Yang, CR; Knepper, MA; , J Am Soc Nephrol, DOI://10.1681/ASN.0000000000000089 (2023)
• Estimated Prevalence, Tumor Spectrum, and Neurofibromatosis Type 1-Like Phenotype of CDKN2A-Related Melanoma-Astrocytoma Syndrome  Sargen, MR; Kim, J; Potjer, TP et al. JAMA Dermatol, DOI://10.1001/jamadermatol.2023.2621 (2023)
• BRG1 HSA domain interactions with BCL7 proteins are critical for remodeling and gene expression  Dietrich, N; Trotter, K; Ward, JM; Archer, TK; , Life Sci Alliance, DOI://10.26508/lsa.202201770 (2023)
• Exposure to lung-migrating helminth protects against murine SARS-CoV-2 infection through macrophage-dependent T cell activation  Oyesola, OO; Hilligan, KL; Namasivayam, S et al. Sci Immunol, DOI://10.1126/sciimmunol.adf8161 (2023)
• Epigenetic signature of human immune aging in the GESTALT study  Roy, R; Kuo, PL; Candia, J et al. Elife, DOI://10.7554/eLife.86136 (2023)
• Positional influence on cellular transcriptional identity revealed through spatially segmented single-cell transcriptomics  Morse, DB; Michalowski, AM; Ceribelli, M et al. Cell Syst, DOI://10.1016/j.cels.2023.05.003 (2023)
• Deep learning-based decision forest for hereditary clear cell renal cell carcinoma segmentation on MRI  Lay, N; Anari, PY; Chaurasia, A et al. Med Phys, DOI://10.1002/mp.16303 (2023)
• A gene duplication of a septin reveals a developmentally regulated filament length control mechanism  Cannon, KS; Vargas-Muniz, JM; Billington, N et al. J Cell Biol, DOI://10.1083/jcb.202204063 (2023)
• A novel de novo TP63 mutation in whole-exome sequencing of a Syrian family with Oral cleft and ectrodactyly  Simpson, CL; Kimble, DC; Chandrasekharappa, SC et al. Mol Genet Genomic Med, DOI://10.1002/mgg3.2179 (2023)
• Expression quantitative trait methylation analysis elucidates gene regulatory effects of DNA methylation: the Framingham Heart Study  Keshawarz, A; Bui, H; Joehanes, R et al. Sci Rep, DOI://10.1038/s41598-023-39936-3 (2023)

• Improving segmentation and detection of lesions in CT scans using intensity distribution supervision  Shin, SY; Shen, TC; Summers, RM; , Comput Med Imaging Graph, DOI://10.1016/j.compmedimag.2023.102259 (2023)
• Lesion recognition by XPC, TFIIH and XPA in DNA excision repair  Kim, J; Li, CL; Chen, X et al. Nature, DOI://10.1038/s41586-023-05959-z (2023)
• A single N-terminal amino acid determines the distinct roles of histones H3 and H3.3 in the Drosophila male germline stem cell lineage  Chandrasekhara, C; Ranjan, R; Urban, JA et al. PLoS Biol, DOI://10.1371/journal.pbio.3002098 (2023)
• A chromosome-scale epigenetic map of the Hydra genome reveals conserved regulators of cell state  Cazet, JF; Siebert, S; Little, HM et al. Genome Res, DOI://10.1101/gr.277040.122 (2023)
• SMYD3 represses tumor-intrinsic interferon response in HPV-negative squamous cell carcinoma of the head and neck  Nigam, N; Bernard, B; Sevilla, S et al. Cell Rep, DOI://10.1016/j.celrep.2023.112823 (2023)
• LAST-seq: single-cell RNA sequencing by direct amplification of single-stranded RNA without prior reverse transcription and second-strand synthesis  Lyu, J; Chen, C; , Genome Biol, DOI://10.1186/s13059-023-03025-5 (2023)
• Estimated Prevalence and Clinical Manifestations of UBA1 Variants Associated With VEXAS Syndrome in a Clinical Population  Beck, DB; Bodian, DL; Shah, V et al. JAMA, DOI://10.1001/jama.2022.24836 (2023)
• Soluble prefusion-closed HIV-envelope trimers with glycan-covered bases  Olia, AS; Cheng, C; Zhou, T et al. iScience, DOI://10.1016/j.isci.2023.107403 (2023)
• Toxic antiphage defense proteins inhibited by intragenic antitoxin proteins  Zhong, A; Jiang, X; Hickman, AB et al. Proc Natl Acad Sci U S A, DOI://10.1073/pnas.2307382120 (2023)
• Short hydrocarbon stapled ApoC2-mimetic peptides activate lipoprotein lipase and lower plasma triglycerides in mice  Sviridov, D; Dasseux, A; Reimund, M et al. Front Cardiovasc Med, DOI://10.3389/fcvm.2023.1223920 (2023)
• In vivo Polycystin-1 interactome using a novel Pkd1 knock-in mouse model  Lin, CC; Menezes, LF; Qiu, J et al. PLoS One, DOI://10.1371/journal.pone.0289778 (2023)
• mRNA location and translation rate determine protein targeting to dual destinations  Gasparski, AN; Moissoglu, K; Pallikkuth, S et al. Mol Cell, DOI://10.1016/j.molcel.2023.06.036 (2023)
• Variant STAT4 and Response to Ruxolitinib in an Autoinflammatory Syndrome  Baghdassarian, H; Blackstone, SA; Clay, OS et al. N Engl J Med, DOI://10.1056/NEJMoa2202318 (2023)
• Exome-wide association study of treatment-resistant depression suggests novel treatment targets  Shah, SB; Peddada, TN; Song, C et al. Sci Rep, DOI://10.1038/s41598-023-38984-z (2023)
• Transcription factor TCF-1 regulates the functions, but not the development, of lymphoid tissue inducer subsets in different tissues  Zheng, M; Yao, C; Ren, G et al. Cell Rep, DOI://10.1016/j.celrep.2023.112924 (2023)
• Tracking genetic variants in the biomedical literature using LitVar 2.0  Allot, A; Wei, CH; Phan, L et al. Nat Genet, DOI://10.1038/s41588-023-01414-x (2023)
• Crosstalk between ILC2s and Th2 cells varies among mouse models  Gurram, RK; Wei, D; Yu, Q et al. Cell Rep, DOI://10.1016/j.celrep.2023.112073 (2023)
• Extreme dynamics in a biomolecular condensate  Galvanetto, N; Ivanović, MT; Chowdhury, A et al. Nature, DOI://10.1038/s41586-023-06329-5 (2023)

• A virus-induced circular RNA maintains latent infection of Kaposi's sarcoma herpesvirus  Tagawa, T; Oh, D; Dremel, S et al. Proc Natl Acad Sci U S A, DOI://10.1073/pnas.2212864120 (2023)
• Reactivated thyroid hormone receptor β attenuates anaplastic thyroid cancer (ATC) stem cell activity  Zhu, X; Zhao, L; Doolittle, WKL; Cheng, SY; , Endocr Relat Cancer, DOI://10.1530/ERC-22-0306 (2023)
• Long wavelength-sensing cones of zebrafish retina exhibit multiple layers of transcriptional heterogeneity  Farre, AA; Sun, C; Starostik, MR et al. Front Cell Neurosci, DOI://10.3389/fncel.2023.1214084 (2023)
• Regulation of endogenous retrovirus-derived regulatory elements by GATA2/3 and MSX2 in human trophoblast stem cells  Du, C; Jiang, J; Li, Y et al. Genome Res, DOI://10.1101/gr.277150.122 (2023)
• Questionnaire-Based Polyexposure Assessment Outperforms Polygenic Scores for Classification of Type 2 Diabetes in a Multiancestry Cohort  Akhtari, FS; Lloyd, D; Burkholder, A et al. Diabetes Care, DOI://10.2337/dc22-0295 (2023)
• RNA exosome ribonuclease DIS3 degrades Pou6f1 to promote mouse pre-implantation cell differentiation  Wu, D; Dean, J; , Cell Rep, DOI://10.1016/j.celrep.2023.112047 (2023)

• Identifying sources of human interictal discharges with travelling wave and white matter propagation  Withers, CP; Diamond, JM; Yang, B et al. Brain, DOI://10.1093/brain/awad259 (2023)
• Multilevel human secondary lymphoid immune system compartmentalization revealed by complementary imaging approaches  Oyler, BL; Valencia-Dávila, JA; Moysi, E et al. iScience, DOI://10.1016/j.isci.2023.107261 (2023)
• NF-κB subunits direct kinetically distinct transcriptional cascades in antigen receptor-activated B cells  Zhao, M; Chauhan, P; Sherman, CA et al. Nat Immunol, DOI://10.1038/s41590-023-01561-7 (2023)
• Senescence-induced cellular reprogramming drives cnidarian whole-body regeneration  Salinas-Saavedra, M; Febrimarsa, ; Krasovec, G et al. Cell Rep, DOI://10.1016/j.celrep.2023.112687 (2023)
• SOX9 is a key component of RUNX2-regulated transcriptional circuitry in osteosarcoma  Kim, YI; Tseng, YC; Ayaz, G et al. Cell Biosci, DOI://10.1186/s13578-023-01088-2 (2023)
• Multi-tiered approach to detect autoimmune cross-reactivity of therapeutic T cell receptors  Ishii, K; Davies, JS; Sinkoe, AL et al. Sci Adv, DOI://10.1126/sciadv.adg9845 (2023)
• PRDM10 RCC: A Birt-Hogg-Dubé-like Syndrome Associated With Lipoma and Highly Penetrant, Aggressive Renal Tumors Morphologically Resembling Type 2 Papillary Renal Cell Carcinoma  Schmidt, LS; Vocke, CD; Ricketts, CJ et al. Urology, DOI://10.1016/j.urology.2023.04.035 (2023)
• The genome of antibiotic-producing colonies of the Pelagophyte alga Chrysophaeum taylorii reveals a diverse and non-canonical capacity for secondary metabolism  Davison, JR; Rajwani, R; Zhao, G; Bewley, CA; , Sci Rep, DOI://10.1038/s41598-023-38042-8 (2023)
• Zinc-finger BED domains drive the formation of the active Hermes transpososome by asymmetric DNA binding  Lannes, L; Furman, CM; Hickman, AB; Dyda, F; , Nat Commun, DOI://10.1038/s41467-023-40210-3 (2023)
• Whole-genome methylation analysis of aging human tissues identifies age-related changes in developmental and neurological pathways  Tharakan, R; Ubaida-Mohien, C; Dunn, C et al. Aging Cell, DOI://10.1111/acel.13847 (2023)
• Manifold learning for fMRI time-varying functional connectivity  Gonzalez-Castillo, J; Fernandez, IS; Lam, KC et al. Front Hum Neurosci, DOI://10.3389/fnhum.2023.1134012 (2023)
• eEF2 diphthamide modification restrains spurious frameshifting to maintain translational fidelity  Shin, BS; Ivanov, IP; Kim, JR et al. Nucleic Acids Res, DOI://10.1093/nar/gkad461 (2023)
• Primary oxidative phosphorylation defects lead to perturbations in the human B cell repertoire  Gordon-Lipkin, EM; Banerjee, P; Franco, JLM et al. Front Immunol, DOI://10.3389/fimmu.2023.1142634 (2023)
• BOLD Response is more than just magnitude: Improving detection sensitivity through capturing hemodynamic profiles  Chen, G; Taylor, PA; Reynolds, RC et al. Neuroimage, DOI://10.1016/j.neuroimage.2023.120224 (2023)
• Integrative analysis of individual-level data and high-dimensional summary statistics  Fu, S; Deng, L; Zhang, H et al. Bioinformatics, DOI://10.1093/bioinformatics/btad156 (2023)
• Integrating massive RNA-seq data to elucidate transcriptome dynamics in Drosophila melanogaster  Hu Qian, S; Shi, MW; Wang, DY et al. Brief Bioinform, DOI://10.1093/bib/bbad177 (2023)
• Optimized quantification of intra-host viral diversity in SARS-CoV-2 and influenza virus sequence data  Roder, AE; Johnson, KEE; Knoll, M et al. mBio, DOI://10.1128/mbio.01046-23 (2023)
• AIONER: all-in-one scheme-based biomedical named entity recognition using deep learning  Luo, L; Wei, CH; Lai, PT et al. Bioinformatics, DOI://10.1093/bioinformatics/btad310 (2023)
• Haplotype-based analysis resolves missing heritability in oculocutaneous albinism type 1B  Loftus, SK; Gillis, MF; Lundh, L et al. Am J Hum Genet, DOI://10.1016/j.ajhg.2023.05.012 (2023)
• Stiff matrix induces exosome secretion to promote tumour growth  Wu, B; Liu, DA; Guan, L et al. Nat Cell Biol, DOI://10.1038/s41556-023-01092-1 (2023)
• Analysis of several common APOBEC-type mutations in bladder tumors suggests links to viral infection  Rao, N; Starrett, GJ; Piaskowski, ML et al. Cancer Prev Res (Phila), DOI://10.1158/1940-6207.CAPR-23-0112 (2023)
• Structural basis for pre-tRNA recognition and processing by the human tRNA splicing endonuclease complex  Hayne, CK; Butay, KJU; Stewart, ZD et al. Nat Struct Mol Biol, DOI://10.1038/s41594-023-00991-z (2023)
• Author Correction: The power of genetic diversity in genome-wide association studies of lipids  Graham, SE; Clarke, SL; Wu, KH et al. Nature, DOI://10.1038/s41586-023-06194-2 (2023)
• rWTC-MBTA: autologous vaccine prevents metastases via antitumor immune responses  Ye, J; Wang, H; Medina, R et al. J Exp Clin Cancer Res, DOI://10.1186/s13046-023-02744-8 (2023)

• Gut dysbiosis in Thai intrahepatic cholangiocarcinoma and hepatocellular carcinoma  Pomyen, Y; Chaisaingmongkol, J; Rabibhadana, S et al. Sci Rep, DOI://10.1038/s41598-023-38307-2 (2023)
• Structural and photophysical characterization of the small ultra-red fluorescent protein  Maiti, A; Buffalo, CZ; Saurabh, S et al. Nat Commun, DOI://10.1038/s41467-023-39776-9 (2023)
• Noncoding RNA circuitry in melanoma onset, plasticity, and therapeutic response  Grafanaki, K; Grammatikakis, I; Ghosh, A et al. Pharmacol Ther, DOI://10.1016/j.pharmthera.2023.108466 (2023)
• GATA3 induces the pathogenicity of Th17 cells via regulating GM-CSF expression  Butcher, MJ; Gurram, RK; Zhu, X et al. Front Immunol, DOI://10.3389/fimmu.2023.1186580 (2023)
• Modification of a Conventional Deep Learning Model to Classify Simulated Breathing Patterns: A Step toward Real-Time Monitoring of Patients with Respiratory Infectious Diseases  Park, J; Mah, AJ; Nguyen, T et al. Sensors (Basel), DOI://10.3390/s23125592 (2023)
• Modulation of WNT, Activin/Nodal, and MAPK Signaling Pathways Increases Arterial Hemogenic Endothelium and Hematopoietic Stem/Progenitor Cell Formation During Human iPSC Differentiation  Li, Y; Ding, J; Araki, D et al. Stem Cells, DOI://10.1093/stmcls/sxad040 (2023)
• Cerebrospinal Fluid Protein Biomarker Discovery in CLN3  Dang Do, AN; Sleat, DE; Campbell, K et al. J Proteome Res, DOI://10.1021/acs.jproteome.3c00199 (2023)
• Clinical, genetic, and structural characterization of a novel TUBB4B tubulinopathy  McFadden, JR; Tolete, CDP; Huang, Y et al. Mol Genet Metab Rep, DOI://10.1016/j.ymgmr.2023.100990 (2023)
• GRL-142 binds to and impairs HIV-1 integrase nuclear localization signal and potently suppresses highly INSTI-resistant HIV-1 variants  Aoki, M; Aoki-Ogata, H; Bulut, H et al. Sci Adv, DOI://10.1126/sciadv.adg2955 (2023)
• A longitudinal transcriptomic analysis from unfed to post-engorgement midguts of adult female Ixodes scapularis  Lu, S; Martins, LA; Kotál, J et al. Sci Rep, DOI://10.1038/s41598-023-38207-5 (2023)
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• Upper age-limits for US male HPV-vaccination for oropharyngeal cancer prevention: A microsimulation-based modeling study  Landy, R; Haber, G; Graubard, BI et al. J Natl Cancer Inst, DOI://10.1093/jnci/djad009 (2023)
• Implementing machine learning methods with complex survey data: Lessons learned on the impacts of accounting sampling weights in gradient boosting  MacNell, N; Feinstein, L; Wilkerson, J et al. PLoS One, DOI://10.1371/journal.pone.0280387 (2023)
• GWAS Explorer: an open-source tool to explore, visualize, and access GWAS summary statistics in the PLCO Atlas  Machiela, MJ; Huang, WY; Wong, W et al. Sci Data, DOI://10.1038/s41597-022-01921-2 (2023)
• Transcriptomic Analysis of Human Podocytes In Vitro: Effects of Differentiation and APOL1 Genotype  Yoshida, T; Latt, KZ; Rosenberg, AZ et al. Kidney Int Rep, DOI://10.1016/j.ekir.2022.10.011 (2023)
• The repertoire of CSF antiviral antibodies in patients with neuroinflammatory diseases  Enose-Akahata, Y; Wang, L; Almsned, F et al. Sci Adv, DOI://10.1126/sciadv.abq6978 (2023)
• Preclinical optimization of a GPC2-targeting CAR T-cell therapy for neuroblastoma  Sun, M; Cao, Y; Okada, R et al. J Immunother Cancer, DOI://10.1136/jitc-2022-005881 (2023)

• Characterization of diverse populations of sinoatrial node cells and their proliferation potential at single nucleus resolution  Qu, JH; Telljohann, R; Byshkov, R; Lakatta, EG; , Heliyon, DOI://10.1016/j.heliyon.2022.e12708 (2023)
• The Ewald sphere/focus gradient does not limit the resolution of cryoEM reconstructions  Heymann, JB J Struct Biol X, DOI://10.1016/j.yjsbx.2022.100083 (2023)
• Novel polyomaviruses identified in fecal samples from four carnivore species  Kraberger, S; Serieys, LEK; Riley, SPD et al. Arch Virol, DOI://10.1007/s00705-022-05675-5 (2023)
• Comparison of busulfan and total body irradiation conditioning on hematopoietic clonal dynamics following lentiviral gene transfer in rhesus macaques  Abraham, DM; Lozano, RJ; Guitart, X et al. Mol Ther Methods Clin Dev, DOI://10.1016/j.omtm.2022.12.001 (2023)
• Prenatal social support in low-risk pregnancy shapes placental epigenome  Tesfaye, M; Wu, J; Biedrzycki, RJ et al. BMC Med, DOI://10.1186/s12916-022-02701-w (2023)
• Epigenetic gestational age and the relationship with developmental milestones in early childhood  Polinski, KJ; Robinson, SL; Putnick, DL et al. Hum Mol Genet, DOI://10.1093/hmg/ddac302 (2023)

• A dataset for plain language adaptation of biomedical abstracts  Attal, K; Ondov, B; Demner-Fushman, D; , Sci Data, DOI://10.1038/s41597-022-01920-3 (2023)
• A stem cell epigenome is associated with primary nonresponse to CD19 CAR T-cells in pediatric acute lymphoblastic leukemia  Masih, KE; Gardner, RA; Chou, HC et al. Blood Adv, DOI://10.1182/bloodadvances.2022008977 (2023)
• Variable selection for discrete survival model with frailty in presence of left truncation and right censoring: Studying association of environmental toxicants on time-to-pregnancy  Saha, A; Sundaram, R; , Stat Med, DOI://10.1002/sim.9609 (2023)
• Investigating Determinants and Evaluating Deep Learning Training Approaches for Visual Acuity in Foveal Hypoplasia  Malechka, VV; Duong, D; Bordonada, KD et al. Ophthalmol Sci, DOI://10.1016/j.xops.2022.100225 (2023)
• An inducible amphipathic α-helix mediates subcellular targeting and membrane binding of RPE65  Uppal, S; Liu, T; Galvan, E et al. Life Sci Alliance, DOI://10.26508/lsa.202201546 (2023)
• Application of Molecular Dynamics to Expand Docking Program's Exploratory Capabilities and to Evaluate Its Predictions  Kasprzak, WK; Shapiro, BA; , Methods Mol Biol, DOI://10.1007/978-1-0716-2687-0_6 (2023)