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VMD
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Description

VMD is a molecular visualization program for displaying, animating, and analyzing large biomolecular systems using 3-D graphics and built-in scripting. It has powerful and comprehensive filtering and configuration capabilities. It is especially well-suited for analyzing NAMD results.

How to Use

Type:

module load vmd

At the command line, type

vmd

This application requires an X-Windows connection.

Type 'vmd' at the prompt. Input is menu-driven.

Documentation