Biowulf High Performance Computing at the NIH
Scientific Databases

VEP data

For use by the VEP program.
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Database Location on HPC systemsLast Updated
Cat genome (Felis Catus) 6.2
Sep 2011 (Felis catus 6.2, felCat5) assembly by the International Cat Genome Sequencing Consortium.
/fdb/VEP/81/cache/felis_catus/81_Felis_catus_6.2 29 Aug 2017
(Updated upon app update)
Source: ftp.ensembl.org
Dog Genome (Canis familiaris)
May 2005 assembly from the Broad Institute
/fdb/VEP/81/cache/canis_familiaris/81_CanFam3.1 29 Aug 2017
(Updated upon app update)
Source: ftp.ensembl.org
Human Genome GRCh38
Sep 2013 assembly of human genome.
/fdb/VEP/81/cache/homo_sapiens/81_GRCh38 29 Aug 2017
(Updated upon app update)
Source: ftp.ensembl.org
Human Genome hg19
Build 37, hg19 (Feb 2009) from the International Human Genome Consortium
/fdb/VEP/81/cache/homo_sapiens/81_GRCh37 29 Aug 2017
(Updated upon app update)
Source: ftp.ensembl.org
Mouse Genome (Mus musculus) mm10
mm10, GRC Build 38
/fdb/VEP/81/cache/mus_musculus/81_GRCm38 29 Aug 2017
(Updated upon app update)
Source: ftp.ensembl.org

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