Biowulf High Performance Computing at the NIH
Scientific Databases

Dog Genome Data

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Description Format Location on HPC systems Last Updated
May 2005 assembly from the Broad InstituteMySQL
Accessible through the HPC mirror of the UCSC Genome Browser. Also available for direct MySQL queries from the Biowulf cluster nodes.
NIH mirror of UCSC genome browser 2019-10-20 19:04:27
(Updated weekly)
Source: hgdownload.cse.ucsc.edu
May 2005 assembly from the Broad Institutedefuse data
Data used by the deFuse program for gene fusion discovery using RNA-Seq data
/fdb/defuse/canis 2014-10-20 08:51:25
(Updated one-time)
Source: hgdownload.cse.ucsc.edu
May 2005 assembly from the Broad InstituteIgenomes
Illumina's Igenomes are a collection of reference sequences and annotation files for commonly analyzed organisms. More info at Illumina
/fdb/igenomes/Canis_familiaris 2012-05-31 16:03:12
(Updated one-time)
Source: support.illumina.com

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