Scientific Reference Data
back to index

annovar hg38

ANNOVAR is an efficient software tool to utilize update-to-date information to functionally annotate genetic variants detected from diverse genomes.

Database Organization ANNOVAR 
Database Website https://annovar.openbioinformatics.org
Location /fdb/annovar/current/hg38
Last Updated 2024-01-04
Related Application ANNOVAR
Update Schedule arbitrary

230 Relevant Files

Show
/fdb/annovar/current/hg38/.annovar_date
/fdb/annovar/current/hg38/annovar_downdb.log
/fdb/annovar/current/hg38/hg38.exon.mutation.txt.variant_function
/fdb/annovar/current/hg38/hg38.fa
/fdb/annovar/current/hg38/hg38_AFR.sites.2014_10.txt
/fdb/annovar/current/hg38/hg38_AFR.sites.2014_10.txt.idx
/fdb/annovar/current/hg38/hg38_AFR.sites.2015_08.txt
/fdb/annovar/current/hg38/hg38_AFR.sites.2015_08.txt.idx
/fdb/annovar/current/hg38/hg38_ALL.sites.2014_10.txt
/fdb/annovar/current/hg38/hg38_ALL.sites.2014_10.txt.idx
/fdb/annovar/current/hg38/hg38_ALL.sites.2015_08.txt
/fdb/annovar/current/hg38/hg38_ALL.sites.2015_08.txt.idx
/fdb/annovar/current/hg38/hg38_AMR.sites.2014_10.txt
/fdb/annovar/current/hg38/hg38_AMR.sites.2014_10.txt.idx
/fdb/annovar/current/hg38/hg38_AMR.sites.2015_08.txt
/fdb/annovar/current/hg38/hg38_AMR.sites.2015_08.txt.idx
/fdb/annovar/current/hg38/hg38_EAS.sites.2014_10.txt
/fdb/annovar/current/hg38/hg38_EAS.sites.2014_10.txt.idx
/fdb/annovar/current/hg38/hg38_EAS.sites.2015_08.txt
/fdb/annovar/current/hg38/hg38_EAS.sites.2015_08.txt.idx
/fdb/annovar/current/hg38/hg38_EUR.sites.2014_10.txt
/fdb/annovar/current/hg38/hg38_EUR.sites.2014_10.txt.idx
/fdb/annovar/current/hg38/hg38_EUR.sites.2015_08.txt
/fdb/annovar/current/hg38/hg38_EUR.sites.2015_08.txt.idx
/fdb/annovar/current/hg38/hg38_SAS.sites.2014_10.txt
/fdb/annovar/current/hg38/hg38_SAS.sites.2014_10.txt.idx
/fdb/annovar/current/hg38/hg38_SAS.sites.2015_08.txt
/fdb/annovar/current/hg38/hg38_SAS.sites.2015_08.txt.idx
/fdb/annovar/current/hg38/hg38_abraom.txt
/fdb/annovar/current/hg38/hg38_abraom.txt.idx
/fdb/annovar/current/hg38/hg38_avdblist.txt
/fdb/annovar/current/hg38/hg38_avsnp142.txt
/fdb/annovar/current/hg38/hg38_avsnp142.txt.idx
/fdb/annovar/current/hg38/hg38_avsnp144.txt
/fdb/annovar/current/hg38/hg38_avsnp144.txt.idx
/fdb/annovar/current/hg38/hg38_avsnp147.txt
/fdb/annovar/current/hg38/hg38_avsnp147.txt.idx
/fdb/annovar/current/hg38/hg38_avsnp150.txt
/fdb/annovar/current/hg38/hg38_avsnp150.txt.idx
/fdb/annovar/current/hg38/hg38_cadd_1.4.txt
/fdb/annovar/current/hg38/hg38_cadd_1.4.txt.idx
/fdb/annovar/current/hg38/hg38_cadd_1.5.txt
/fdb/annovar/current/hg38/hg38_cadd_1.5.txt.idx
/fdb/annovar/current/hg38/hg38_ccdsGene.txt
/fdb/annovar/current/hg38/hg38_ccdsGeneMrna.fa
/fdb/annovar/current/hg38/hg38_clinvar_20140702.txt
/fdb/annovar/current/hg38/hg38_clinvar_20140702.txt.idx
/fdb/annovar/current/hg38/hg38_clinvar_20140902.txt
/fdb/annovar/current/hg38/hg38_clinvar_20140902.txt.idx
/fdb/annovar/current/hg38/hg38_clinvar_20150330.txt
/fdb/annovar/current/hg38/hg38_clinvar_20150330.txt.idx
/fdb/annovar/current/hg38/hg38_clinvar_20150629.txt
/fdb/annovar/current/hg38/hg38_clinvar_20150629.txt.idx
/fdb/annovar/current/hg38/hg38_clinvar_20151201.txt
/fdb/annovar/current/hg38/hg38_clinvar_20151201.txt.idx
/fdb/annovar/current/hg38/hg38_clinvar_20160302.txt
/fdb/annovar/current/hg38/hg38_clinvar_20160302.txt.idx
/fdb/annovar/current/hg38/hg38_clinvar_20161128.txt
/fdb/annovar/current/hg38/hg38_clinvar_20161128.txt.idx
/fdb/annovar/current/hg38/hg38_clinvar_20170130.txt
/fdb/annovar/current/hg38/hg38_clinvar_20170130.txt.idx
/fdb/annovar/current/hg38/hg38_clinvar_20170501.txt
/fdb/annovar/current/hg38/hg38_clinvar_20170501.txt.idx
/fdb/annovar/current/hg38/hg38_clinvar_20170905.txt
/fdb/annovar/current/hg38/hg38_clinvar_20170905.txt.idx
/fdb/annovar/current/hg38/hg38_clinvar_20180603.txt
/fdb/annovar/current/hg38/hg38_clinvar_20180603.txt.idx
/fdb/annovar/current/hg38/hg38_clinvar_20190305.txt
/fdb/annovar/current/hg38/hg38_clinvar_20190305.txt.idx
/fdb/annovar/current/hg38/hg38_clinvar_20200316.txt
/fdb/annovar/current/hg38/hg38_clinvar_20200316.txt.idx
/fdb/annovar/current/hg38/hg38_clinvar_20200419.txt
/fdb/annovar/current/hg38/hg38_clinvar_20200419.txt.idx
/fdb/annovar/current/hg38/hg38_clinvar_20210123.txt
/fdb/annovar/current/hg38/hg38_clinvar_20210123.txt.idx
/fdb/annovar/current/hg38/hg38_clinvar_20210501.txt
/fdb/annovar/current/hg38/hg38_clinvar_20210501.txt.idx
/fdb/annovar/current/hg38/hg38_clinvar_20220320.txt
/fdb/annovar/current/hg38/hg38_clinvar_20220320.txt.idx
/fdb/annovar/current/hg38/hg38_clinvar_20221231.txt
/fdb/annovar/current/hg38/hg38_clinvar_20221231.txt.idx
/fdb/annovar/current/hg38/hg38_clinvar_20230416.txt
/fdb/annovar/current/hg38/hg38_clinvar_20230416.txt.idx
/fdb/annovar/current/hg38/hg38_cosmic70.txt
/fdb/annovar/current/hg38/hg38_cosmic70.txt.idx
/fdb/annovar/current/hg38/hg38_cosmic92_coding.txt
/fdb/annovar/current/hg38/hg38_cosmic92_coding.txt.idx
/fdb/annovar/current/hg38/hg38_cosmic92_noncoding.txt
/fdb/annovar/current/hg38/hg38_cosmic92_noncoding.txt.idx
/fdb/annovar/current/hg38/hg38_cytoBand.txt
/fdb/annovar/current/hg38/hg38_dbnsfp30a.txt
/fdb/annovar/current/hg38/hg38_dbnsfp30a.txt.idx
/fdb/annovar/current/hg38/hg38_dbnsfp31a_interpro.txt
/fdb/annovar/current/hg38/hg38_dbnsfp31a_interpro.txt.idx
/fdb/annovar/current/hg38/hg38_dbnsfp33a.txt
/fdb/annovar/current/hg38/hg38_dbnsfp33a.txt.idx
/fdb/annovar/current/hg38/hg38_dbnsfp35a.txt
/fdb/annovar/current/hg38/hg38_dbnsfp35a.txt.idx
/fdb/annovar/current/hg38/hg38_dbnsfp35c.txt
/fdb/annovar/current/hg38/hg38_dbnsfp35c.txt.idx
/fdb/annovar/current/hg38/hg38_dbnsfp41a.txt
/fdb/annovar/current/hg38/hg38_dbnsfp41a.txt.idx
/fdb/annovar/current/hg38/hg38_dbnsfp41c.txt
/fdb/annovar/current/hg38/hg38_dbnsfp41c.txt.idx
/fdb/annovar/current/hg38/hg38_dbnsfp42a.txt
/fdb/annovar/current/hg38/hg38_dbnsfp42a.txt.idx
/fdb/annovar/current/hg38/hg38_dbnsfp42c.txt
/fdb/annovar/current/hg38/hg38_dbnsfp42c.txt.idx
/fdb/annovar/current/hg38/hg38_dbscsnv11.txt
/fdb/annovar/current/hg38/hg38_dbscsnv11.txt.idx
/fdb/annovar/current/hg38/hg38_download.txt
/fdb/annovar/current/hg38/hg38_ensGene.txt
/fdb/annovar/current/hg38/hg38_ensGene40.txt
/fdb/annovar/current/hg38/hg38_ensGene41.txt
/fdb/annovar/current/hg38/hg38_ensGeneMrna.fa
/fdb/annovar/current/hg38/hg38_ensGeneMrna40.fa
/fdb/annovar/current/hg38/hg38_ensGeneMrna41.fa
/fdb/annovar/current/hg38/hg38_esp6500siv2_aa.txt
/fdb/annovar/current/hg38/hg38_esp6500siv2_aa.txt.idx
/fdb/annovar/current/hg38/hg38_esp6500siv2_all.txt
/fdb/annovar/current/hg38/hg38_esp6500siv2_all.txt.idx
/fdb/annovar/current/hg38/hg38_esp6500siv2_ea.txt
/fdb/annovar/current/hg38/hg38_esp6500siv2_ea.txt.idx
/fdb/annovar/current/hg38/hg38_exac03.txt
/fdb/annovar/current/hg38/hg38_exac03.txt.idx
/fdb/annovar/current/hg38/hg38_exac03nonpsych.txt
/fdb/annovar/current/hg38/hg38_exac03nonpsych.txt.idx
/fdb/annovar/current/hg38/hg38_exac03nontcga.txt
/fdb/annovar/current/hg38/hg38_exac03nontcga.txt.idx
/fdb/annovar/current/hg38/hg38_exome.hg38_multianno.txt
/fdb/annovar/current/hg38/hg38_gene4denovo201907.txt
/fdb/annovar/current/hg38/hg38_gene4denovo201907.txt.idx
/fdb/annovar/current/hg38/hg38_gme.txt
/fdb/annovar/current/hg38/hg38_gme.txt.idx
/fdb/annovar/current/hg38/hg38_gnomad211_exome.txt
/fdb/annovar/current/hg38/hg38_gnomad211_exome.txt.idx
/fdb/annovar/current/hg38/hg38_gnomad211_genome.txt
/fdb/annovar/current/hg38/hg38_gnomad211_genome.txt.idx
/fdb/annovar/current/hg38/hg38_gnomad30_genome.txt
/fdb/annovar/current/hg38/hg38_gnomad30_genome.txt.idx
/fdb/annovar/current/hg38/hg38_gnomad312_genome.txt
/fdb/annovar/current/hg38/hg38_gnomad312_genome.txt.idx
/fdb/annovar/current/hg38/hg38_gnomad40.txt
/fdb/annovar/current/hg38/hg38_gnomad40.txt.idx
/fdb/annovar/current/hg38/hg38_gnomad40_exome.txt
/fdb/annovar/current/hg38/hg38_gnomad40_exome.txt.idx
/fdb/annovar/current/hg38/hg38_gnomad40_genome.txt
/fdb/annovar/current/hg38/hg38_gnomad40_genome.txt.idx
/fdb/annovar/current/hg38/hg38_gnomad_exome.txt
/fdb/annovar/current/hg38/hg38_gnomad_exome.txt.idx
/fdb/annovar/current/hg38/hg38_gnomad_genome.txt
/fdb/annovar/current/hg38/hg38_gnomad_genome.txt.idx
/fdb/annovar/current/hg38/hg38_gwasCatalog.txt
/fdb/annovar/current/hg38/hg38_hrcr1.txt
/fdb/annovar/current/hg38/hg38_hrcr1.txt.idx
/fdb/annovar/current/hg38/hg38_icgc28.txt
/fdb/annovar/current/hg38/hg38_icgc28.txt.idx
/fdb/annovar/current/hg38/hg38_intervar_20180118.txt
/fdb/annovar/current/hg38/hg38_intervar_20180118.txt.idx
/fdb/annovar/current/hg38/hg38_kaviar_20150923.txt
/fdb/annovar/current/hg38/hg38_kaviar_20150923.txt.idx
/fdb/annovar/current/hg38/hg38_kgXref.txt
/fdb/annovar/current/hg38/hg38_knownGene.txt
/fdb/annovar/current/hg38/hg38_knownGeneMrna.fa
/fdb/annovar/current/hg38/hg38_ljb26_all.txt
/fdb/annovar/current/hg38/hg38_ljb26_all.txt.idx
/fdb/annovar/current/hg38/hg38_mcap.txt
/fdb/annovar/current/hg38/hg38_mcap.txt.idx
/fdb/annovar/current/hg38/hg38_mutscore.txt
/fdb/annovar/current/hg38/hg38_mutscore.txt.idx
/fdb/annovar/current/hg38/hg38_nci60.txt
/fdb/annovar/current/hg38/hg38_nci60.txt.idx
/fdb/annovar/current/hg38/hg38_refGene.txt
/fdb/annovar/current/hg38/hg38_refGeneMrna.fa
/fdb/annovar/current/hg38/hg38_refGeneVersion.txt
/fdb/annovar/current/hg38/hg38_refGeneWithVer.txt
/fdb/annovar/current/hg38/hg38_refGeneWithVerMrna.fa
/fdb/annovar/current/hg38/hg38_refLink.txt
/fdb/annovar/current/hg38/hg38_regsnpintron.txt
/fdb/annovar/current/hg38/hg38_regsnpintron.txt.idx
/fdb/annovar/current/hg38/hg38_revel.txt
/fdb/annovar/current/hg38/hg38_revel.txt.idx
/fdb/annovar/current/hg38/hg38_rmsk.txt
/fdb/annovar/current/hg38/hg38_spidex.txt
/fdb/annovar/current/hg38/hg38_spidex.txt.idx
/fdb/annovar/current/hg38/hg38_spliceai_filtered.txt
/fdb/annovar/current/hg38/hg38_spliceai_filtered.txt.idx
/fdb/annovar/current/hg38/hg38_tmcsnpdb.txt
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV20.txt
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV20Mrna.fa
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV22.txt
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV22Mrna.fa
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV23.txt
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV23Mrna.fa
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV24.txt
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV24Mrna.fa
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV25.txt
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV25Mrna.fa
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV26.txt
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV26Mrna.fa
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV27.fa
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV27.txt
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV27Mrna.fa
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV28.txt
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV28Mrna.fa
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV29.txt
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV29Mrna.fa
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV30.txt
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV30Mrna.fa
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV31.txt
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV31Mrna.fa
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV32.txt
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV32Mrna.fa
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV33.txt
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV33Mrna.fa
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV34.txt
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV34Mrna.fa
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV35.txt
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV35Mrna.fa
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV36.txt
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV36Mrna.fa
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV37.txt
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV37Mrna.fa
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV38.txt
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV38Mrna.fa
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV39.txt
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV39Mrna.fa
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV40.txt
/fdb/annovar/current/hg38/hg38_wgEncodeGencodeBasicV40Mrna.fa
/fdb/annovar/current/hg38/hg38_wgRna.txt

OR

Search by keywordSearches through metadata using keywords
Search by filenameSearches through filenames where available