The Taxonomy Database is a curated classification and nomenclature for all of the organisms in the public sequence databases.
| Database Organization | NCBI |
| Database Website | https://ncbi.nlm.nih.gov/taxonomy |
| Location | /fdb/taxonomy |
| Last Updated | 2024-11-19 |
| Update Schedule | 3 times / week |
| /fdb/taxonomy/citations.dmp |
| /fdb/taxonomy/delnodes.dmp |
| /fdb/taxonomy/division.dmp |
| /fdb/taxonomy/gc.prt |
| /fdb/taxonomy/gencode.dmp |
| /fdb/taxonomy/gi_taxid_nucl.dmp |
| /fdb/taxonomy/gi_taxid_prot.dmp |
| /fdb/taxonomy/merged.dmp |
| /fdb/taxonomy/names.dmp |
| /fdb/taxonomy/nodes.dmp |
| /fdb/taxonomy/nucl_gb.accession2taxid |
| /fdb/taxonomy/nucl_wgs.accession2taxid |
| /fdb/taxonomy/pdb.accession2taxid |
| /fdb/taxonomy/prot.accession2taxid |
| /fdb/taxonomy/refdb.yml~ |
| /fdb/taxonomy/taxdb.btd |
| /fdb/taxonomy/taxdb.bti |
| Search by keyword | Searches through metadata using keywords |
| Search by filename | Searches through filenames where available |