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UCSC bosTau6 (goldenPath)

The UCSC Genomics Institute maintains a broad collection of vertebrate and model organism assemblies and annotations, along with a large suite of tools for viewing, analyzing and downloading data.

Database Organization UCSC Genomics Institute 
Database Website https://genome.ucsc.edu/
Location /fdb/genomebrowser/goldenPath/bosTau6
Last Updated 2023-06-18
Organism Bos taurus
Related Application ucsc
Update Schedule weekly

150 Relevant Files

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/fdb/genomebrowser/goldenPath/bosTau6/database/all_est.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/all_est.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/all_mrna.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/all_mrna.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/augustusGene.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/augustusGene.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/bamAllNumtSSorted.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/bamAllNumtSSorted.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/bigFiles.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/bigFiles.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/chainCanFam2.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/chainCanFam2.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/chainCanFam2Link.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/chainCanFam2Link.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/chainHg19.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/chainHg19.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/chainHg19Link.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/chainHg19Link.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/chainMm9.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/chainMm9.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/chainMm9Link.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/chainMm9Link.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/chainMonDom5.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/chainMonDom5.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/chainMonDom5Link.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/chainMonDom5Link.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/chainOrnAna1.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/chainOrnAna1.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/chainOrnAna1Link.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/chainOrnAna1Link.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/chainRn4.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/chainRn4.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/chainRn4Link.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/chainRn4Link.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/chainSusScr2.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/chainSusScr2.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/chainSusScr2Link.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/chainSusScr2Link.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/chromAlias.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/chromAlias.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/chromInfo.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/chromInfo.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/cpgIslandExt.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/cpgIslandExt.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/cpgIslandExtUnmasked.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/cpgIslandExtUnmasked.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/ctgPos2.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/ctgPos2.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/cytoBandIdeo.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/cytoBandIdeo.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/ensGene.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/ensGene.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/ensGtp.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/ensGtp.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/ensPep.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/ensPep.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/ensemblSource.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/ensemblSource.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/ensemblToGeneName.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/ensemblToGeneName.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/estOrientInfo.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/estOrientInfo.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/gap.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/gap.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/gbLoaded.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/gbLoaded.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/gc5BaseBw.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/gc5BaseBw.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/gold.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/gold.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/grp.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/grp.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/hgFindSpec.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/hgFindSpec.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/hgFindSpec_pushedout.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/hgFindSpec_pushedout.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/history.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/history.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/intronEst.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/intronEst.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/microsat.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/microsat.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/mrnaOrientInfo.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/mrnaOrientInfo.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/nestedRepeats.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/nestedRepeats.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/netCanFam2.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/netCanFam2.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/netHg19.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/netHg19.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/netMm9.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/netMm9.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/netMonDom5.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/netMonDom5.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/netOrnAna1.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/netOrnAna1.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/netRn4.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/netRn4.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/netSusScr2.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/netSusScr2.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/numtS.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/numtS.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/numtSAssembled.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/numtSAssembled.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/numtSMitochondrion.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/numtSMitochondrion.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/refFlat.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/refFlat.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/refGene.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/refGene.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/refSeqAli.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/refSeqAli.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/rmsk.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/rmsk.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/simpleRepeat.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/simpleRepeat.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/tRNAs.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/tRNAs.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/tableDescriptions.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/tableDescriptions.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/tableList.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/tableList.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/trackDb.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/trackDb.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/trackDb_pushedout.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/trackDb_pushedout.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/ucscToEnsembl.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/ucscToEnsembl.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/xenoMrna.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/xenoMrna.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/xenoRefFlat.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/xenoRefFlat.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/xenoRefGene.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/xenoRefGene.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/database/xenoRefSeqAli.sql
/fdb/genomebrowser/goldenPath/bosTau6/database/xenoRefSeqAli.txt.gz
/fdb/genomebrowser/goldenPath/bosTau6/liftOver/bosTau6ToBosTau4.over.chain.gz
/fdb/genomebrowser/goldenPath/bosTau6/liftOver/bosTau6ToBosTau5.over.chain.gz
/fdb/genomebrowser/goldenPath/bosTau6/liftOver/bosTau6ToBosTau7.over.chain.gz
/fdb/genomebrowser/goldenPath/bosTau6/liftOver/bosTau6ToBosTau8.over.chain.gz
/fdb/genomebrowser/goldenPath/bosTau6/liftOver/bosTau6ToCanFam2.over.chain.gz
/fdb/genomebrowser/goldenPath/bosTau6/liftOver/bosTau6ToCanFam3.over.chain.gz
/fdb/genomebrowser/goldenPath/bosTau6/liftOver/bosTau6ToEquCab2.over.chain.gz
/fdb/genomebrowser/goldenPath/bosTau6/liftOver/bosTau6ToHg19.over.chain.gz
/fdb/genomebrowser/goldenPath/bosTau6/liftOver/bosTau6ToMm9.over.chain.gz
/fdb/genomebrowser/goldenPath/bosTau6/liftOver/bosTau6ToMonDom5.over.chain.gz
/fdb/genomebrowser/goldenPath/bosTau6/liftOver/bosTau6ToOrnAna1.over.chain.gz
/fdb/genomebrowser/goldenPath/bosTau6/liftOver/bosTau6ToRn4.over.chain.gz
/fdb/genomebrowser/goldenPath/bosTau6/liftOver/bosTau6ToSusScr2.over.chain.gz
/fdb/genomebrowser/goldenPath/bosTau6/liftOver/md5sum.txt


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