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UCSC canFam3 (gbdb)

The UCSC Genomics Institute maintains a broad collection of vertebrate and model organism assemblies and annotations, along with a large suite of tools for viewing, analyzing and downloading data.

Database Organization UCSC Genomics Institute 
Database Website https://genome.ucsc.edu/
Location /fdb/genomebrowser/gbdb/canFam3
Last Updated 2023-05-04
Organism Canis lupus familiaris
Related Application ucsc
Update Schedule weekly

32 Relevant Files

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/fdb/genomebrowser/gbdb/canFam3/canFam3.2bit
/fdb/genomebrowser/gbdb/canFam3/trackDb.ix
/fdb/genomebrowser/gbdb/canFam3/trackDb.ixx
/fdb/genomebrowser/gbdb/canFam3/trackDb.offsets
/fdb/genomebrowser/gbdb/canFam3/trackDb.offsets.ixx
/fdb/genomebrowser/gbdb/canFam3/trackDb.txt
/fdb/genomebrowser/gbdb/canFam3/bbi/evaSnp.bb
/fdb/genomebrowser/gbdb/canFam3/bbi/evaSnp4.bb
/fdb/genomebrowser/gbdb/canFam3/bbi/gc5Base.bw
/fdb/genomebrowser/gbdb/canFam3/html/description.html
/fdb/genomebrowser/gbdb/canFam3/liftOver/canFam3ToBosTau6.over.chain.gz
/fdb/genomebrowser/gbdb/canFam3/liftOver/canFam3ToCanFam2.over.chain.gz
/fdb/genomebrowser/gbdb/canFam3/liftOver/canFam3ToCanFam4.over.chain.gz
/fdb/genomebrowser/gbdb/canFam3/liftOver/canFam3ToCanFam5.over.chain.gz
/fdb/genomebrowser/gbdb/canFam3/liftOver/canFam3ToCanFam6.over.chain.gz
/fdb/genomebrowser/gbdb/canFam3/liftOver/canFam3ToFelCat8.over.chain.gz
/fdb/genomebrowser/gbdb/canFam3/liftOver/canFam3ToHg19.over.chain.gz
/fdb/genomebrowser/gbdb/canFam3/liftOver/canFam3ToHg38.over.chain.gz
/fdb/genomebrowser/gbdb/canFam3/liftOver/canFam3ToMm10.over.chain.gz
/fdb/genomebrowser/gbdb/canFam3/liftOver/canFam3ToRn6.over.chain.gz
/fdb/genomebrowser/gbdb/canFam3/liftOver/canFam3ToTarSyr2.over.chain.gz
/fdb/genomebrowser/gbdb/canFam3/liftOver/canFam3ToXenTro9.over.chain.gz
/fdb/genomebrowser/gbdb/canFam3/ncbiRefSeq/ncbiRefSeqGenomicDiff.bb
/fdb/genomebrowser/gbdb/canFam3/ncbiRefSeq/ncbiRefSeqOther.bb
/fdb/genomebrowser/gbdb/canFam3/ncbiRefSeq/ncbiRefSeqOther.ix
/fdb/genomebrowser/gbdb/canFam3/ncbiRefSeq/ncbiRefSeqOther.ixx
/fdb/genomebrowser/gbdb/canFam3/ncbiRefSeq/ncbiRefSeqVersion.txt
/fdb/genomebrowser/gbdb/canFam3/ncbiRefSeq/seqNcbiRefSeq.rna.fa
/fdb/genomebrowser/gbdb/canFam3/transMap/V5/canFam3.ensembl.transMapV5.bigPsl
/fdb/genomebrowser/gbdb/canFam3/transMap/V5/canFam3.est.transMapV5.bigPsl
/fdb/genomebrowser/gbdb/canFam3/transMap/V5/canFam3.refseq.transMapV5.bigPsl
/fdb/genomebrowser/gbdb/canFam3/transMap/V5/canFam3.rna.transMapV5.bigPsl


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