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UCSC canFam4 (gbdb)

The UCSC Genomics Institute maintains a broad collection of vertebrate and model organism assemblies and annotations, along with a large suite of tools for viewing, analyzing and downloading data.

Database Organization UCSC Genomics Institute 
Database Website https://genome.ucsc.edu/
Location /fdb/genomebrowser/gbdb/canFam4
Last Updated 2026-09-29
Organism Canis lupus familiaris
Related Application ucsc
Update Schedule weekly

60 Relevant Files

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/fdb/genomebrowser/gbdb/canFam4/canFam4.2bit
/fdb/genomebrowser/gbdb/canFam4/trackDb.ix
/fdb/genomebrowser/gbdb/canFam4/trackDb.ixx
/fdb/genomebrowser/gbdb/canFam4/trackDb.offsets
/fdb/genomebrowser/gbdb/canFam4/trackDb.offsets.ixx
/fdb/genomebrowser/gbdb/canFam4/trackDb.txt
/fdb/genomebrowser/gbdb/canFam4/TOGAvHg38v1/HLTOGAannotVsHg38v1.bb
/fdb/genomebrowser/gbdb/canFam4/TOGAvHg38v1/HLTOGAannotVsHg38v1.ix
/fdb/genomebrowser/gbdb/canFam4/TOGAvHg38v1/HLTOGAannotVsHg38v1.ixx
/fdb/genomebrowser/gbdb/canFam4/bbi/altAllele/28ChromiumDogs.filtered.b614.simple.NoMishcka.vcf.gz
/fdb/genomebrowser/gbdb/canFam4/bbi/altAllele/28ChromiumDogs.filtered.b614.simple.NoMishcka.vcf.gz.tbi
/fdb/genomebrowser/gbdb/canFam4/bbi/gc5BaseBw/gc5Base.bw
/fdb/genomebrowser/gbdb/canFam4/html/description.html
/fdb/genomebrowser/gbdb/canFam4/liftOver/canFam4ToCanFam3.over.chain.gz
/fdb/genomebrowser/gbdb/canFam4/liftOver/canFam4ToCanFam5.over.chain.gz
/fdb/genomebrowser/gbdb/canFam4/liftOver/canFam4ToCanFam6.over.chain.gz
/fdb/genomebrowser/gbdb/canFam4/liftOver/canFam4ToGCF_014441545.1.over.chain.gz
/fdb/genomebrowser/gbdb/canFam4/liftOver/canFam4ToHg38.over.chain.gz
/fdb/genomebrowser/gbdb/canFam4/liftOver/canFam4ToLoxAfr3.over.chain.gz
/fdb/genomebrowser/gbdb/canFam4/liftOver/canFam4ToMm10.over.chain.gz
/fdb/genomebrowser/gbdb/canFam4/liftOver/canFam4ToMm39.over.chain.gz
/fdb/genomebrowser/gbdb/canFam4/liftOver/canFam4ToMonDom5.over.chain.gz
/fdb/genomebrowser/gbdb/canFam4/liftOver/canFam4ToNeoSch1.over.chain.gz
/fdb/genomebrowser/gbdb/canFam4/liftOver/canFam4ToOrnAna2.over.chain.gz
/fdb/genomebrowser/gbdb/canFam4/liftOver/canFam4ToPanTro6.over.chain.gz
/fdb/genomebrowser/gbdb/canFam4/liftOver/canFam4ToRheMac10.over.chain.gz
/fdb/genomebrowser/gbdb/canFam4/ncbiRefSeq/ncbiRefSeqGenomicDiff.bb
/fdb/genomebrowser/gbdb/canFam4/ncbiRefSeq/ncbiRefSeqOther.bb
/fdb/genomebrowser/gbdb/canFam4/ncbiRefSeq/ncbiRefSeqOther.ix
/fdb/genomebrowser/gbdb/canFam4/ncbiRefSeq/ncbiRefSeqOther.ixx
/fdb/genomebrowser/gbdb/canFam4/ncbiRefSeq/ncbiRefSeqVersion.txt
/fdb/genomebrowser/gbdb/canFam4/ncbiRefSeq/seqNcbiRefSeq.rna.fa
/fdb/genomebrowser/gbdb/canFam4/quickLift/GCF_014441545.1.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/GCF_014441545.1.link.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/canFam2.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/canFam2.link.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/canFam3.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/canFam3.link.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/canFam5.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/canFam5.link.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/canFam6.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/canFam6.link.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/hg38.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/hg38.link.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/loxAfr3.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/loxAfr3.link.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/mm10.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/mm10.link.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/mm39.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/mm39.link.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/monDom5.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/monDom5.link.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/neoSch1.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/neoSch1.link.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/ornAna2.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/ornAna2.link.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/panTro6.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/panTro6.link.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/rheMac10.bb
/fdb/genomebrowser/gbdb/canFam4/quickLift/rheMac10.link.bb


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