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UCSC cavPor3 (goldenPath)

The UCSC Genomics Institute maintains a broad collection of vertebrate and model organism assemblies and annotations, along with a large suite of tools for viewing, analyzing and downloading data.

Database Organization UCSC Genomics Institute 
Database Website https://genome.ucsc.edu/
Location /fdb/genomebrowser/goldenPath/cavPor3
Last Updated 2023-06-18
Organism Cavia porcellus
Related Application ucsc
Update Schedule weekly

181 Relevant Files

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/fdb/genomebrowser/goldenPath/cavPor3/database/all_est.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/all_est.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/all_mrna.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/all_mrna.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/augustusGene.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/augustusGene.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/bigFiles.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/bigFiles.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/blastHg18KG.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/blastHg18KG.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/chainGalGal3.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/chainGalGal3.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/chainGalGal3Link.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/chainGalGal3Link.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/chainGalVar1.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/chainGalVar1.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/chainGalVar1Link.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/chainGalVar1Link.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/chainHg19.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/chainHg19.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/chainHg19Link.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/chainHg19Link.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/chainMm10.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/chainMm10.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/chainMm10Link.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/chainMm10Link.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/chainMm39.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/chainMm39.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/chainMm39Link.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/chainMm39Link.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/chainMonDom4.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/chainMonDom4.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/chainMonDom4Link.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/chainMonDom4Link.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/chainOryCun2.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/chainOryCun2.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/chainOryCun2Link.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/chainOryCun2Link.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/chainRn6.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/chainRn6.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/chainRn6Link.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/chainRn6Link.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/chromAlias.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/chromAlias.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/chromInfo.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/chromInfo.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/cpgIslandExt.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/cpgIslandExt.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/cpgIslandExtUnmasked.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/cpgIslandExtUnmasked.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/cytoBandIdeo.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/cytoBandIdeo.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/ensGene.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/ensGene.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/ensGtp.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/ensGtp.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/ensPep.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/ensPep.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/ensemblSource.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/ensemblSource.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/ensemblToGeneName.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/ensemblToGeneName.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/estOrientInfo.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/estOrientInfo.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/extNcbiRefSeq.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/extNcbiRefSeq.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/gap.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/gap.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/gbLoaded.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/gbLoaded.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/gc5Base.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/gc5Base.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/genscan.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/genscan.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/genscanPep.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/genscanPep.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/genscanSubopt.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/genscanSubopt.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/gold.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/gold.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/grp.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/grp.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/hgFindSpec.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/hgFindSpec.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/hgFindSpec_pushedout.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/hgFindSpec_pushedout.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/history.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/history.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/intronEst.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/intronEst.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/microsat.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/microsat.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/mrnaOrientInfo.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/mrnaOrientInfo.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/ncbiRefSeq.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/ncbiRefSeq.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/ncbiRefSeqCds.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/ncbiRefSeqCds.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/ncbiRefSeqCurated.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/ncbiRefSeqCurated.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/ncbiRefSeqLink.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/ncbiRefSeqLink.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/ncbiRefSeqOther.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/ncbiRefSeqOther.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/ncbiRefSeqPepTable.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/ncbiRefSeqPepTable.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/ncbiRefSeqPredicted.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/ncbiRefSeqPredicted.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/ncbiRefSeqPsl.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/ncbiRefSeqPsl.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/nestedRepeats.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/nestedRepeats.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/netGalGal3.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/netGalGal3.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/netGalVar1.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/netGalVar1.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/netHg19.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/netHg19.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/netMm10.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/netMm10.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/netMm39.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/netMm39.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/netMonDom4.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/netMonDom4.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/netOryCun2.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/netOryCun2.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/netRn6.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/netRn6.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/nscanGene.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/nscanGene.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/nscanPep.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/nscanPep.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/quality.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/quality.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/refFlat.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/refFlat.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/refGene.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/refGene.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/refSeqAli.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/refSeqAli.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/rmsk.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/rmsk.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/seqNcbiRefSeq.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/seqNcbiRefSeq.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/simpleRepeat.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/simpleRepeat.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/tRNAs.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/tRNAs.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/tableDescriptions.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/tableDescriptions.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/tableList.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/tableList.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/trackDb.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/trackDb.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/trackDb_pushedout.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/trackDb_pushedout.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/ucscToRefSeq.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/ucscToRefSeq.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/windowmaskerSdust.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/windowmaskerSdust.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/xenoMrna.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/xenoMrna.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/xenoRefFlat.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/xenoRefFlat.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/xenoRefGene.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/xenoRefGene.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/database/xenoRefSeqAli.sql
/fdb/genomebrowser/goldenPath/cavPor3/database/xenoRefSeqAli.txt.gz
/fdb/genomebrowser/goldenPath/cavPor3/liftOver/cavPor3ToGalGal3.over.chain.gz
/fdb/genomebrowser/goldenPath/cavPor3/liftOver/cavPor3ToGalVar1.over.chain.gz
/fdb/genomebrowser/goldenPath/cavPor3/liftOver/cavPor3ToHg18.over.chain.gz
/fdb/genomebrowser/goldenPath/cavPor3/liftOver/cavPor3ToHg19.over.chain.gz
/fdb/genomebrowser/goldenPath/cavPor3/liftOver/cavPor3ToHg38.over.chain.gz
/fdb/genomebrowser/goldenPath/cavPor3/liftOver/cavPor3ToMm10.over.chain.gz
/fdb/genomebrowser/goldenPath/cavPor3/liftOver/cavPor3ToMm9.over.chain.gz
/fdb/genomebrowser/goldenPath/cavPor3/liftOver/cavPor3ToMonDom4.over.chain.gz
/fdb/genomebrowser/goldenPath/cavPor3/liftOver/cavPor3ToOryCun1.over.chain.gz
/fdb/genomebrowser/goldenPath/cavPor3/liftOver/cavPor3ToOryCun2.over.chain.gz
/fdb/genomebrowser/goldenPath/cavPor3/liftOver/cavPor3ToRn4.over.chain.gz
/fdb/genomebrowser/goldenPath/cavPor3/liftOver/cavPor3ToRn6.over.chain.gz
/fdb/genomebrowser/goldenPath/cavPor3/liftOver/md5sum.txt


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