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UCSC danRer10 (goldenPath)

The UCSC Genomics Institute maintains a broad collection of vertebrate and model organism assemblies and annotations, along with a large suite of tools for viewing, analyzing and downloading data.

Database Organization UCSC Genomics Institute 
Database Website https://genome.ucsc.edu/
Location /fdb/genomebrowser/goldenPath/danRer10
Last Updated 2023-06-18
Organism Danio rerio
Related Application ucsc
Update Schedule weekly

153 Relevant Files

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/fdb/genomebrowser/goldenPath/danRer10/database/all_est.sql
/fdb/genomebrowser/goldenPath/danRer10/database/all_est.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/all_mrna.sql
/fdb/genomebrowser/goldenPath/danRer10/database/all_mrna.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/augustusGene.sql
/fdb/genomebrowser/goldenPath/danRer10/database/augustusGene.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/bigFiles.sql
/fdb/genomebrowser/goldenPath/danRer10/database/bigFiles.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/chainGalGal5.sql
/fdb/genomebrowser/goldenPath/danRer10/database/chainGalGal5.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/chainGalGal5Link.sql
/fdb/genomebrowser/goldenPath/danRer10/database/chainGalGal5Link.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/chainHg38.sql
/fdb/genomebrowser/goldenPath/danRer10/database/chainHg38.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/chainHg38Link.sql
/fdb/genomebrowser/goldenPath/danRer10/database/chainHg38Link.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/chainMelGal5.sql
/fdb/genomebrowser/goldenPath/danRer10/database/chainMelGal5.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/chainMelGal5Link.sql
/fdb/genomebrowser/goldenPath/danRer10/database/chainMelGal5Link.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/chainRn6.sql
/fdb/genomebrowser/goldenPath/danRer10/database/chainRn6.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/chainRn6Link.sql
/fdb/genomebrowser/goldenPath/danRer10/database/chainRn6Link.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/chromAlias.sql
/fdb/genomebrowser/goldenPath/danRer10/database/chromAlias.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/chromInfo.sql
/fdb/genomebrowser/goldenPath/danRer10/database/chromInfo.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/cpgIslandExt.sql
/fdb/genomebrowser/goldenPath/danRer10/database/cpgIslandExt.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/cpgIslandExtUnmasked.sql
/fdb/genomebrowser/goldenPath/danRer10/database/cpgIslandExtUnmasked.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/cytoBandIdeo.sql
/fdb/genomebrowser/goldenPath/danRer10/database/cytoBandIdeo.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/ensGene.sql
/fdb/genomebrowser/goldenPath/danRer10/database/ensGene.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/ensGtp.sql
/fdb/genomebrowser/goldenPath/danRer10/database/ensGtp.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/ensPep.sql
/fdb/genomebrowser/goldenPath/danRer10/database/ensPep.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/ensemblSource.sql
/fdb/genomebrowser/goldenPath/danRer10/database/ensemblSource.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/ensemblToGeneName.sql
/fdb/genomebrowser/goldenPath/danRer10/database/ensemblToGeneName.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/estOrientInfo.sql
/fdb/genomebrowser/goldenPath/danRer10/database/estOrientInfo.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/extNcbiRefSeq.sql
/fdb/genomebrowser/goldenPath/danRer10/database/extNcbiRefSeq.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/gap.sql
/fdb/genomebrowser/goldenPath/danRer10/database/gap.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/gbLoaded.sql
/fdb/genomebrowser/goldenPath/danRer10/database/gbLoaded.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/gc5BaseBw.sql
/fdb/genomebrowser/goldenPath/danRer10/database/gc5BaseBw.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/genscan.sql
/fdb/genomebrowser/goldenPath/danRer10/database/genscan.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/gold.sql
/fdb/genomebrowser/goldenPath/danRer10/database/gold.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/grcIncidentDb.sql
/fdb/genomebrowser/goldenPath/danRer10/database/grcIncidentDb.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/grp.sql
/fdb/genomebrowser/goldenPath/danRer10/database/grp.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/hgFindSpec.sql
/fdb/genomebrowser/goldenPath/danRer10/database/hgFindSpec.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/hgFindSpec_pushedout.sql
/fdb/genomebrowser/goldenPath/danRer10/database/hgFindSpec_pushedout.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/history.sql
/fdb/genomebrowser/goldenPath/danRer10/database/history.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/intronEst.sql
/fdb/genomebrowser/goldenPath/danRer10/database/intronEst.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/mgcFullMrna.sql
/fdb/genomebrowser/goldenPath/danRer10/database/mgcFullMrna.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/mgcGenes.sql
/fdb/genomebrowser/goldenPath/danRer10/database/mgcGenes.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/microsat.sql
/fdb/genomebrowser/goldenPath/danRer10/database/microsat.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/mmBlastTab.sql
/fdb/genomebrowser/goldenPath/danRer10/database/mmBlastTab.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/mrnaOrientInfo.sql
/fdb/genomebrowser/goldenPath/danRer10/database/mrnaOrientInfo.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/ncbiRefSeq.sql
/fdb/genomebrowser/goldenPath/danRer10/database/ncbiRefSeq.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/ncbiRefSeqCds.sql
/fdb/genomebrowser/goldenPath/danRer10/database/ncbiRefSeqCds.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/ncbiRefSeqCurated.sql
/fdb/genomebrowser/goldenPath/danRer10/database/ncbiRefSeqCurated.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/ncbiRefSeqLink.sql
/fdb/genomebrowser/goldenPath/danRer10/database/ncbiRefSeqLink.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/ncbiRefSeqOther.sql
/fdb/genomebrowser/goldenPath/danRer10/database/ncbiRefSeqOther.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/ncbiRefSeqPepTable.sql
/fdb/genomebrowser/goldenPath/danRer10/database/ncbiRefSeqPepTable.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/ncbiRefSeqPredicted.sql
/fdb/genomebrowser/goldenPath/danRer10/database/ncbiRefSeqPredicted.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/ncbiRefSeqPsl.sql
/fdb/genomebrowser/goldenPath/danRer10/database/ncbiRefSeqPsl.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/nestedRepeats.sql
/fdb/genomebrowser/goldenPath/danRer10/database/nestedRepeats.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/netGalGal5.sql
/fdb/genomebrowser/goldenPath/danRer10/database/netGalGal5.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/netHg38.sql
/fdb/genomebrowser/goldenPath/danRer10/database/netHg38.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/netMelGal5.sql
/fdb/genomebrowser/goldenPath/danRer10/database/netMelGal5.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/netRn6.sql
/fdb/genomebrowser/goldenPath/danRer10/database/netRn6.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/refFlat.sql
/fdb/genomebrowser/goldenPath/danRer10/database/refFlat.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/refGene.sql
/fdb/genomebrowser/goldenPath/danRer10/database/refGene.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/refSeqAli.sql
/fdb/genomebrowser/goldenPath/danRer10/database/refSeqAli.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/rmsk.sql
/fdb/genomebrowser/goldenPath/danRer10/database/rmsk.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/seqNcbiRefSeq.sql
/fdb/genomebrowser/goldenPath/danRer10/database/seqNcbiRefSeq.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/simpleRepeat.sql
/fdb/genomebrowser/goldenPath/danRer10/database/simpleRepeat.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/tableDescriptions.sql
/fdb/genomebrowser/goldenPath/danRer10/database/tableDescriptions.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/tableList.sql
/fdb/genomebrowser/goldenPath/danRer10/database/tableList.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/trackDb.sql
/fdb/genomebrowser/goldenPath/danRer10/database/trackDb.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/trackDb_pushedout.sql
/fdb/genomebrowser/goldenPath/danRer10/database/trackDb_pushedout.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/ucscToINSDC.sql
/fdb/genomebrowser/goldenPath/danRer10/database/ucscToINSDC.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/ucscToRefSeq.sql
/fdb/genomebrowser/goldenPath/danRer10/database/ucscToRefSeq.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/windowmaskerSdust.sql
/fdb/genomebrowser/goldenPath/danRer10/database/windowmaskerSdust.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/xenoMrna.sql
/fdb/genomebrowser/goldenPath/danRer10/database/xenoMrna.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/xenoRefFlat.sql
/fdb/genomebrowser/goldenPath/danRer10/database/xenoRefFlat.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/xenoRefGene.sql
/fdb/genomebrowser/goldenPath/danRer10/database/xenoRefGene.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/database/xenoRefSeqAli.sql
/fdb/genomebrowser/goldenPath/danRer10/database/xenoRefSeqAli.txt.gz
/fdb/genomebrowser/goldenPath/danRer10/liftOver/danRer10ToDanRer11.over.chain.gz
/fdb/genomebrowser/goldenPath/danRer10/liftOver/danRer10ToDanRer7.over.chain.gz
/fdb/genomebrowser/goldenPath/danRer10/liftOver/danRer10ToFr3.over.chain.gz
/fdb/genomebrowser/goldenPath/danRer10/liftOver/danRer10ToGalGal5.over.chain.gz
/fdb/genomebrowser/goldenPath/danRer10/liftOver/danRer10ToGasAcu1.over.chain.gz
/fdb/genomebrowser/goldenPath/danRer10/liftOver/danRer10ToHg19.over.chain.gz
/fdb/genomebrowser/goldenPath/danRer10/liftOver/danRer10ToHg38.over.chain.gz
/fdb/genomebrowser/goldenPath/danRer10/liftOver/danRer10ToMm10.over.chain.gz
/fdb/genomebrowser/goldenPath/danRer10/liftOver/danRer10ToOryLat2.over.chain.gz
/fdb/genomebrowser/goldenPath/danRer10/liftOver/danRer10ToRn6.over.chain.gz
/fdb/genomebrowser/goldenPath/danRer10/liftOver/danRer10ToTetNig2.over.chain.gz
/fdb/genomebrowser/goldenPath/danRer10/liftOver/danRer10ToXenTro7.over.chain.gz
/fdb/genomebrowser/goldenPath/danRer10/liftOver/md5sum.txt


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