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UCSC xenTro9 (gbdb)

The UCSC Genomics Institute maintains a broad collection of vertebrate and model organism assemblies and annotations, along with a large suite of tools for viewing, analyzing and downloading data.

Database Organization UCSC Genomics Institute 
Database Website https://genome.ucsc.edu/
Location /fdb/genomebrowser/gbdb/xenTro9
Last Updated 2023-06-13
Organism Xenopus tropicalis
Related Application ucsc
Update Schedule weekly

53 Relevant Files

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/fdb/genomebrowser/gbdb/xenTro9/trackDb.ix
/fdb/genomebrowser/gbdb/xenTro9/trackDb.ixx
/fdb/genomebrowser/gbdb/xenTro9/trackDb.offsets
/fdb/genomebrowser/gbdb/xenTro9/trackDb.offsets.ixx
/fdb/genomebrowser/gbdb/xenTro9/trackDb.txt
/fdb/genomebrowser/gbdb/xenTro9/xenTro9.2bit
/fdb/genomebrowser/gbdb/xenTro9/bbi/gc5BaseBw/gc5Base.bw
/fdb/genomebrowser/gbdb/xenTro9/html/description.html
/fdb/genomebrowser/gbdb/xenTro9/liftOver/xenTro9ToAnoCar2.over.chain.gz
/fdb/genomebrowser/gbdb/xenTro9/liftOver/xenTro9ToCanFam3.over.chain.gz
/fdb/genomebrowser/gbdb/xenTro9/liftOver/xenTro9ToFr3.over.chain.gz
/fdb/genomebrowser/gbdb/xenTro9/liftOver/xenTro9ToGalGal5.over.chain.gz
/fdb/genomebrowser/gbdb/xenTro9/liftOver/xenTro9ToHg38.over.chain.gz
/fdb/genomebrowser/gbdb/xenTro9/liftOver/xenTro9ToMm10.over.chain.gz
/fdb/genomebrowser/gbdb/xenTro9/liftOver/xenTro9ToMm39.over.chain.gz
/fdb/genomebrowser/gbdb/xenTro9/liftOver/xenTro9ToMonDom5.over.chain.gz
/fdb/genomebrowser/gbdb/xenTro9/liftOver/xenTro9ToNanPar1.over.chain.gz
/fdb/genomebrowser/gbdb/xenTro9/liftOver/xenTro9ToXenLae2.over.chain.gz
/fdb/genomebrowser/gbdb/xenTro9/liftOver/xenTro9ToXenTro10.over.chain.gz
/fdb/genomebrowser/gbdb/xenTro9/liftOver/xenTro9ToXenTro3.over.chain.gz
/fdb/genomebrowser/gbdb/xenTro9/liftOver/xenTro9ToXenTro7.over.chain.gz
/fdb/genomebrowser/gbdb/xenTro9/multiz11way/multiz11way.maf
/fdb/genomebrowser/gbdb/xenTro9/multiz11way/phastCons11way.wib
/fdb/genomebrowser/gbdb/xenTro9/multiz11way/phyloP11way.wib
/fdb/genomebrowser/gbdb/xenTro9/ncbiRefSeq/ncbiRefSeqGenomicDiff.bb
/fdb/genomebrowser/gbdb/xenTro9/ncbiRefSeq/ncbiRefSeqOther.bb
/fdb/genomebrowser/gbdb/xenTro9/ncbiRefSeq/ncbiRefSeqOther.ix
/fdb/genomebrowser/gbdb/xenTro9/ncbiRefSeq/ncbiRefSeqOther.ixx
/fdb/genomebrowser/gbdb/xenTro9/ncbiRefSeq/ncbiRefSeqVersion.txt
/fdb/genomebrowser/gbdb/xenTro9/ncbiRefSeq/seqNcbiRefSeq.rna.fa
/fdb/genomebrowser/gbdb/xenTro9/transMap/V5/xenTro9.ensembl.transMapV5.bigPsl
/fdb/genomebrowser/gbdb/xenTro9/transMap/V5/xenTro9.est.transMapV5.bigPsl
/fdb/genomebrowser/gbdb/xenTro9/transMap/V5/xenTro9.refseq.transMapV5.bigPsl
/fdb/genomebrowser/gbdb/xenTro9/transMap/V5/xenTro9.rna.transMapV5.bigPsl
/fdb/genomebrowser/gbdb/xenTro9/uniprot/unipAliSwissprot.bb
/fdb/genomebrowser/gbdb/xenTro9/uniprot/unipAliTrembl.bb
/fdb/genomebrowser/gbdb/xenTro9/uniprot/unipChain.bb
/fdb/genomebrowser/gbdb/xenTro9/uniprot/unipConflict.bb
/fdb/genomebrowser/gbdb/xenTro9/uniprot/unipDisulfBond.bb
/fdb/genomebrowser/gbdb/xenTro9/uniprot/unipDomain.bb
/fdb/genomebrowser/gbdb/xenTro9/uniprot/unipFullSeq.bb
/fdb/genomebrowser/gbdb/xenTro9/uniprot/unipInterest.bb
/fdb/genomebrowser/gbdb/xenTro9/uniprot/unipLocCytopl.bb
/fdb/genomebrowser/gbdb/xenTro9/uniprot/unipLocExtra.bb
/fdb/genomebrowser/gbdb/xenTro9/uniprot/unipLocSignal.bb
/fdb/genomebrowser/gbdb/xenTro9/uniprot/unipLocTransMemb.bb
/fdb/genomebrowser/gbdb/xenTro9/uniprot/unipModif.bb
/fdb/genomebrowser/gbdb/xenTro9/uniprot/unipMut.bb
/fdb/genomebrowser/gbdb/xenTro9/uniprot/unipOther.bb
/fdb/genomebrowser/gbdb/xenTro9/uniprot/unipRepeat.bb
/fdb/genomebrowser/gbdb/xenTro9/uniprot/unipSplice.bb
/fdb/genomebrowser/gbdb/xenTro9/uniprot/unipStruct.bb
/fdb/genomebrowser/gbdb/xenTro9/uniprot/version.txt


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