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UCSC xenTro9 (goldenPath)

The UCSC Genomics Institute maintains a broad collection of vertebrate and model organism assemblies and annotations, along with a large suite of tools for viewing, analyzing and downloading data.

Database Organization UCSC Genomics Institute 
Database Website https://genome.ucsc.edu/
Location /fdb/genomebrowser/goldenPath/xenTro9
Last Updated 2023-06-18
Organism Xenopus tropicalis
Related Application ucsc
Update Schedule weekly

198 Relevant Files

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/fdb/genomebrowser/goldenPath/xenTro9/database/all_est.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/all_est.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/all_mrna.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/all_mrna.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/augustusGene.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/augustusGene.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/bigFiles.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/bigFiles.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/chainAnoCar2.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/chainAnoCar2.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/chainAnoCar2Link.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/chainAnoCar2Link.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/chainCanFam3.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/chainCanFam3.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/chainCanFam3Link.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/chainCanFam3Link.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/chainFr3.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/chainFr3.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/chainFr3Link.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/chainFr3Link.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/chainGalGal5.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/chainGalGal5.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/chainGalGal5Link.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/chainGalGal5Link.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/chainGalGal6.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/chainGalGal6.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/chainGalGal6Link.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/chainGalGal6Link.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/chainHg38.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/chainHg38.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/chainHg38Link.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/chainHg38Link.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/chainMm10.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/chainMm10.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/chainMm10Link.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/chainMm10Link.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/chainMm39.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/chainMm39.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/chainMm39Link.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/chainMm39Link.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/chainMonDom5.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/chainMonDom5.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/chainMonDom5Link.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/chainMonDom5Link.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/chainNanPar1.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/chainNanPar1.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/chainNanPar1Link.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/chainNanPar1Link.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/chainXenLae2.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/chainXenLae2.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/chainXenLae2Link.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/chainXenLae2Link.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/chromAlias.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/chromAlias.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/chromInfo.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/chromInfo.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/cpgIslandExt.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/cpgIslandExt.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/cpgIslandExtUnmasked.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/cpgIslandExtUnmasked.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/cytoBandIdeo.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/cytoBandIdeo.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/ensGene.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/ensGene.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/ensGtp.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/ensGtp.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/ensPep.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/ensPep.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/ensemblSource.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/ensemblSource.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/ensemblToGeneName.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/ensemblToGeneName.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/estOrientInfo.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/estOrientInfo.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/extFile.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/extFile.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/extNcbiRefSeq.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/extNcbiRefSeq.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/gap.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/gap.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/gbLoaded.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/gbLoaded.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/gc5BaseBw.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/gc5BaseBw.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/genscan.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/genscan.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/gold.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/gold.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/grp.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/grp.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/hgFindSpec.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/hgFindSpec.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/hgFindSpec_pushedout.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/hgFindSpec_pushedout.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/history.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/history.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/intronEst.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/intronEst.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/microsat.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/microsat.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/mrnaOrientInfo.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/mrnaOrientInfo.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/multiz11way.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/multiz11way.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/multiz11wayFrames.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/multiz11wayFrames.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/multiz11waySummary.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/multiz11waySummary.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/ncbiRefSeq.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/ncbiRefSeq.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/ncbiRefSeqCds.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/ncbiRefSeqCds.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/ncbiRefSeqCurated.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/ncbiRefSeqCurated.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/ncbiRefSeqLink.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/ncbiRefSeqLink.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/ncbiRefSeqOther.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/ncbiRefSeqOther.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/ncbiRefSeqPepTable.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/ncbiRefSeqPepTable.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/ncbiRefSeqPredicted.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/ncbiRefSeqPredicted.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/ncbiRefSeqPsl.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/ncbiRefSeqPsl.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/nestedRepeats.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/nestedRepeats.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/netAnoCar2.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/netAnoCar2.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/netCanFam3.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/netCanFam3.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/netFr3.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/netFr3.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/netGalGal5.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/netGalGal5.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/netGalGal6.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/netGalGal6.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/netHg38.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/netHg38.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/netMm10.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/netMm10.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/netMm39.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/netMm39.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/netMonDom5.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/netMonDom5.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/netNanPar1.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/netNanPar1.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/netXenLae2.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/netXenLae2.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/phastCons11way.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/phastCons11way.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/phastConsElements11way.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/phastConsElements11way.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/phyloP11way.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/phyloP11way.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/refFlat.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/refFlat.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/refGene.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/refGene.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/refSeqAli.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/refSeqAli.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/rmsk.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/rmsk.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/seqNcbiRefSeq.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/seqNcbiRefSeq.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/simpleRepeat.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/simpleRepeat.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/tableDescriptions.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/tableDescriptions.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/tableList.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/tableList.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/trackDb.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/trackDb.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/trackDb_pushedout.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/trackDb_pushedout.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/ucscToINSDC.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/ucscToINSDC.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/ucscToRefSeq.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/ucscToRefSeq.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/windowmaskerSdust.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/windowmaskerSdust.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/xenoRefFlat.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/xenoRefFlat.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/xenoRefGene.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/xenoRefGene.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/database/xenoRefSeqAli.sql
/fdb/genomebrowser/goldenPath/xenTro9/database/xenoRefSeqAli.txt.gz
/fdb/genomebrowser/goldenPath/xenTro9/liftOver/md5sum.txt
/fdb/genomebrowser/goldenPath/xenTro9/liftOver/xenTro9ToAnoCar2.over.chain.gz
/fdb/genomebrowser/goldenPath/xenTro9/liftOver/xenTro9ToCanFam3.over.chain.gz
/fdb/genomebrowser/goldenPath/xenTro9/liftOver/xenTro9ToFr3.over.chain.gz
/fdb/genomebrowser/goldenPath/xenTro9/liftOver/xenTro9ToGalGal5.over.chain.gz
/fdb/genomebrowser/goldenPath/xenTro9/liftOver/xenTro9ToHg38.over.chain.gz
/fdb/genomebrowser/goldenPath/xenTro9/liftOver/xenTro9ToMm10.over.chain.gz
/fdb/genomebrowser/goldenPath/xenTro9/liftOver/xenTro9ToMonDom5.over.chain.gz
/fdb/genomebrowser/goldenPath/xenTro9/liftOver/xenTro9ToNanPar1.over.chain.gz
/fdb/genomebrowser/goldenPath/xenTro9/liftOver/xenTro9ToXenLae2.over.chain.gz
/fdb/genomebrowser/goldenPath/xenTro9/liftOver/xenTro9ToXenTro3.over.chain.gz
/fdb/genomebrowser/goldenPath/xenTro9/liftOver/xenTro9ToXenTro7.over.chain.gz


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