Scientific Reference Data
back to index

GENCODE (human 18)

The goal of the GENCODE project is to identify and classify all gene features in the human and mouse genomes with high accuracy based on biological evidence, and to release these annotations for the benefit of biomedical research and genome interpretation.

Database Organization European Bioinformatics Institute (EMBL-EBI) 
Database Website https://www.gencodegenes.org/
Location /fdb/GENCODE/Gencode_human/release_18
Last Updated 2013-09-01
Organism Human

33 Relevant Files

Show
/fdb/GENCODE/Gencode_human/release_18/GRCh37.p12.genome.dict
/fdb/GENCODE/Gencode_human/release_18/GRCh37.p12.genome.fa
/fdb/GENCODE/Gencode_human/release_18/GRCh37.p12.genome.fa.fai
/fdb/GENCODE/Gencode_human/release_18/_README.TXT
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.2wayconspseudos.gtf
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.annotation.gtf
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.chr_patch_hapl_scaff.annotation.gtf
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.lncRNA_transcripts.dict
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.lncRNA_transcripts.fa
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.lncRNA_transcripts.fa.fai
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.long_noncoding_RNAs.gtf
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.metadata.Annotation_remark
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.metadata.Exon_supporting_feature
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.metadata.Gene_source
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.metadata.HGNC
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.metadata.PDB
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.metadata.PolyA_feature
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.metadata.Pubmed_id
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.metadata.RefSeq
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.metadata.Selenocysteine
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.metadata.SwissProt
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.metadata.TrEMBL
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.metadata.Transcript_source
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.metadata.Transcript_supporting_feature
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.patch_hapl_scaff.annotation.gtf
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.pc_transcripts.dict
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.pc_transcripts.fa
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.pc_transcripts.fa.fai
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.pc_translations.dict
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.pc_translations.fa
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.pc_translations.fa.fai
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.polyAs.gtf
/fdb/GENCODE/Gencode_human/release_18/gencode.v18.tRNAs.gtf

OR

Search by keywordSearches through metadata using keywords
Search by filenameSearches through filenames where available