Scientific Reference Data
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Caenorhabditis elegans iGenome Data

iGenomes reference sequence and annotation data for Caenorhabditis elegans sourced from NCBI, UCSC, and Ensembl, including builds ce6, ce10, WS[190, 195, 210 220], and WBcel[215,235]

Database Organization Illumina 
Database Website https://support.illumina.com/sequencing/sequencing_software/igenome.html
Location /fdb/igenomes/Caenorhabditis_elegans
Last Updated 2023-12-20
Organism Caenorhabditis elegans
Update Schedule NA

1030 Relevant Files

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/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Annotation/Archives/archive-2013-03-06-20-09-59/Genes/ChromInfo.txt
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Annotation/Archives/archive-2013-03-06-20-09-59/Genes/genes.gtf
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Annotation/Archives/archive-2013-03-06-20-09-59/Genes/refFlat.txt.gz
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Annotation/Archives/archive-2013-03-06-20-09-59/Genes/refGene.txt
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Annotation/Archives/archive-2013-03-06-20-09-59/SmallRNA/mature.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Annotation/Archives/archive-2013-03-06-20-09-59/SmallRNA/precursor.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Annotation/Archives/archive-2014-05-23-16-02-13/Genes/genes.gtf
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Annotation/Archives/archive-2014-05-23-16-02-13/Genes/refFlat.txt.gz
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Annotation/Archives/archive-2014-05-23-16-02-13/SmallRNA/hairpin.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Annotation/Archives/archive-2014-05-23-16-02-13/SmallRNA/mature.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Annotation/Archives/archive-2015-07-17-14-28-46/Genes/genes.gtf
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Annotation/Archives/archive-2015-07-17-14-28-46/Genes/refFlat.txt.gz
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Annotation/Archives/archive-2015-07-17-14-28-46/SmallRNA/hairpin.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Annotation/Archives/archive-2015-07-17-14-28-46/SmallRNA/mature.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/GenomeStudio/Archives/archive-2013-03-06-20-09-59/Caenorhabditis_elegans/Ensembl-WBcel215/ChromInfo.txt
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/GenomeStudio/Archives/archive-2013-03-06-20-09-59/Caenorhabditis_elegans/Ensembl-WBcel215/refGene.txt
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/GenomeStudio/Archives/archive-2013-03-06-20-09-59/Caenorhabditis_elegans/Ensembl-WBcel215/Sequence/I.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/GenomeStudio/Archives/archive-2013-03-06-20-09-59/Caenorhabditis_elegans/Ensembl-WBcel215/Sequence/II.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/GenomeStudio/Archives/archive-2013-03-06-20-09-59/Caenorhabditis_elegans/Ensembl-WBcel215/Sequence/III.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/GenomeStudio/Archives/archive-2013-03-06-20-09-59/Caenorhabditis_elegans/Ensembl-WBcel215/Sequence/IV.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/GenomeStudio/Archives/archive-2013-03-06-20-09-59/Caenorhabditis_elegans/Ensembl-WBcel215/Sequence/MT.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/GenomeStudio/Archives/archive-2013-03-06-20-09-59/Caenorhabditis_elegans/Ensembl-WBcel215/Sequence/V.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/GenomeStudio/Archives/archive-2013-03-06-20-09-59/Caenorhabditis_elegans/Ensembl-WBcel215/Sequence/X.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/AbundantSequences/MT.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/AbundantSequences/MT.fa.2bpb
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/AbundantSequences/MT.fa.vld
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/AbundantSequences/MtDNA.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/AbundantSequences/adapter_contam1.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/AbundantSequences/adapter_contam1.fa.2bpb
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/AbundantSequences/adapter_contam1.fa.vld
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/AbundantSequences/phix.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/AbundantSequences/phix.fa.2bpb
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/AbundantSequences/phix.fa.vld
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/AbundantSequences/polyA.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/AbundantSequences/polyA.fa.2bpb
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/AbundantSequences/polyA.fa.vld
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/AbundantSequences/polyC.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/AbundantSequences/polyC.fa.2bpb
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/AbundantSequences/polyC.fa.vld
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/BWAIndex/genome.fa
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/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/BWAIndex/version0.5.x/genome.fa
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/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/BWAIndex/version0.5.x/genome.fa.rsa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/BWAIndex/version0.5.x/genome.fa.sa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/BWAIndex/version0.6.0/genome.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/BWAIndex/version0.6.0/genome.fa.amb
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/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/BWAIndex/version0.6.0/genome.fa.bwt
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/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/Bowtie2Index/genome.1.bt2
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/Bowtie2Index/genome.2.bt2
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/Bowtie2Index/genome.3.bt2
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/Bowtie2Index/genome.4.bt2
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/Bowtie2Index/genome.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/Bowtie2Index/genome.rev.1.bt2
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/Bowtie2Index/genome.rev.2.bt2
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/BowtieIndex/genome.1.ebwt
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/BowtieIndex/genome.2.ebwt
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/BowtieIndex/genome.3.ebwt
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/BowtieIndex/genome.4.ebwt
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/BowtieIndex/genome.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/BowtieIndex/genome.rev.1.ebwt
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/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/Chromosomes/I.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/Chromosomes/II.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/Chromosomes/III.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/Chromosomes/IV.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/Chromosomes/MT.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/Chromosomes/MtDNA.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/Chromosomes/V.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/Chromosomes/X.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/Squashed-Caenorhabditis_elegans-Ensembl-WBcel215/I.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/Squashed-Caenorhabditis_elegans-Ensembl-WBcel215/I.fa.2bpb
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/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/Squashed-Caenorhabditis_elegans-Ensembl-WBcel215/II.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/Squashed-Caenorhabditis_elegans-Ensembl-WBcel215/II.fa.2bpb
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/Squashed-Caenorhabditis_elegans-Ensembl-WBcel215/II.fa.vld
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/Squashed-Caenorhabditis_elegans-Ensembl-WBcel215/III.fa
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/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/Squashed-Caenorhabditis_elegans-Ensembl-WBcel215/IV.fa
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/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/WholeGenomeFasta/GenomeSize.xml
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel215/Sequence/WholeGenomeFasta/genome.dict
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/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel235/Annotation/Archives/archive-2014-05-27-15-52-14/Genes/genes.gtf
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/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel235/Annotation/Archives/archive-2014-05-27-15-52-14/SmallRNA/hairpin.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel235/Annotation/Archives/archive-2014-05-27-15-52-14/SmallRNA/mature.fa
/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel235/Annotation/Archives/archive-2015-07-17-14-28-46/Genes/genes.gtf
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/fdb/igenomes/Caenorhabditis_elegans/Ensembl/WBcel235/Annotation/Archives/archive-2015-07-17-14-28-46/SmallRNA/mature.fa
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