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T2T CHM13 Assembly

Telomere-to-telomere genomic assembly for CHM13 cell line. More information at https://pubmed.ncbi.nlm.nih.gov/35357919/

Database Organization NCBI 
Database Website https://www.ncbi.nlm.nih.gov/assembly/GCA_009914755.4/
Location /fdb/T2T/CHM13
Last Updated 2022-05-24
Organism Homo sapiens
Update Schedule one-time

71 Relevant Files

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/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_report.txt
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_stats.txt
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_feature_count.txt.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_genomic.fna.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_genomic.gbff.gz
/fdb/T2T/CHM13/v2.0/GCF_009914755.1_T2T-CHM13v2.0.110.20220412.ncbiRefSeq.gtf.gz
/fdb/T2T/CHM13/v2.0/annotation_hashes.txt
/fdb/T2T/CHM13/v2.0/assembly_status.txt
/fdb/T2T/CHM13/v2.0/chm13v2.0_RefSeq_Liftoff_v5.1.gff3.gz
/fdb/T2T/CHM13/v2.0/md5checksums.txt
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/chr2acc
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/AGP/chr1.comp.agp.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/AGP/chr10.comp.agp.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/AGP/chr11.comp.agp.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/AGP/chr12.comp.agp.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/AGP/chr13.comp.agp.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/AGP/chr14.comp.agp.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/AGP/chr15.comp.agp.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/AGP/chr16.comp.agp.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/AGP/chr17.comp.agp.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/AGP/chr18.comp.agp.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/AGP/chr19.comp.agp.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/AGP/chr2.comp.agp.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/AGP/chr20.comp.agp.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/AGP/chr21.comp.agp.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/AGP/chr22.comp.agp.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/AGP/chr3.comp.agp.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/AGP/chr4.comp.agp.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/AGP/chr5.comp.agp.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/AGP/chr6.comp.agp.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/AGP/chr7.comp.agp.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/AGP/chr8.comp.agp.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/AGP/chr9.comp.agp.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/AGP/chrX.comp.agp.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/AGP/chrY.comp.agp.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/FASTA/chr1.fna.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/FASTA/chr10.fna.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/FASTA/chr11.fna.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/FASTA/chr12.fna.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/FASTA/chr13.fna.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/FASTA/chr14.fna.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/FASTA/chr15.fna.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/FASTA/chr16.fna.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/FASTA/chr17.fna.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/FASTA/chr18.fna.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/FASTA/chr19.fna.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/FASTA/chr2.fna.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/FASTA/chr20.fna.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/FASTA/chr21.fna.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/FASTA/chr22.fna.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/FASTA/chr3.fna.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/FASTA/chr4.fna.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/FASTA/chr5.fna.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/FASTA/chr6.fna.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/FASTA/chr7.fna.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/FASTA/chr8.fna.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/FASTA/chr9.fna.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/FASTA/chrX.fna.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/Primary_Assembly/assembled_chromosomes/FASTA/chrY.fna.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/non-nuclear/assembled_chromosomes/chr2acc
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/non-nuclear/assembled_chromosomes/AGP/chrMT.comp.agp.gz
/fdb/T2T/CHM13/v2.0/GCA_009914755.4_T2T-CHM13v2.0_assembly_structure/non-nuclear/assembled_chromosomes/FASTA/chrMT.fna.gz
/fdb/T2T/CHM13/v2.0/analysis_set/chm13v2.0.fa.gz
/fdb/T2T/CHM13/v2.0/analysis_set/chm13v2.0.fa.gz.gzi
/fdb/T2T/CHM13/v2.0/analysis_set/chm13v2.0_PAR.bed
/fdb/T2T/CHM13/v2.0/analysis_set/chm13v2.0_maskedY.fa.gz
/fdb/T2T/CHM13/v2.0/analysis_set/chm13v2.0_maskedY.fa.gz.gzi
/fdb/T2T/CHM13/v2.0/analysis_set/chm13v2.0_maskedY_rCRS.fa.gz
/fdb/T2T/CHM13/v2.0/analysis_set/chm13v2.0_maskedY_rCRS.fa.gz.gzi
/fdb/T2T/CHM13/v2.0/analysis_set/chm13v2.0_noY.fa.gz
/fdb/T2T/CHM13/v2.0/analysis_set/chm13v2.0_noY.fa.gz.gzi

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