Space taken at start
1593216	/data/teacher/hpc-classes/biowulf/serial2swarm
Unpacking input fastq files
Space taken for input files
6.6G	/data/teacher/hpc-classes/biowulf/serial2swarm

[+] Loading hdf5 1.8.15
[+] Loading gcc 5.3.0 ...
[+] Loading novocraft 3.08.02 ...

working on file xaa
# novoalign (AVX2) (V3.08.02 - Build Sep 25 2017 @ 15:26:24) - A short read aligner with qualities.
# (C) 2008-2016 Novocraft Technologies Sdn Bhd.
# License file: /usr/local/apps/novocraft/novoalign.lic
# Licensed to NIH OPEN HELIX
#  novoalign -c 16 -f input/xaa -d /fdb/novoalign/chr_all_hg19.nbx -o SAM
# Starting at Sun Jun  3 18:12:48 2018
# Interpreting input files as Illumina FASTQ, Casava Pipeline 1.8 & later.
# Index Build Version: 2.7
#   Hash length:   14
#     Step size:    2
#     Read Sequences:   225000
#   Unique Alignment:   194256 (86.3%)
#       Multi Mapped:    30065 (13.4%)
#   No Mapping Found:      649 ( 0.3%)
# QC Failures...
#        Read Length:       30 ( 0.0%)
#       Elapsed Time: 87.131 (secs.)
#           CPU Time: 15.77 (min.)
# Done at Sun Jun  3 18:14:30 2018

Space taken for output file
69M	/data/teacher/hpc-classes/biowulf/serial2swarm/out