CHARMM c42b2 Documentation
Quick Start
How to use CHARMM
(usage.doc)
Read and write data
(io.doc)
INFO starting point
(charmm.doc)
Lists
Alphabetical
Index of .doc Files
Full
Alphabetic Table
Menu Item
Extract of .doc Files
First 32
Lines of Each .doc File
Useful .doc Files
constraints & restraints (
cons.doc
)
coordinate manipulation and analysis (
corman.doc
)
time series, correlation functions (
correl.doc
)
dynamics & trajectory manipulation (
dynamc.doc
)
energy commands (
energy.doc
)
X11, GL & PostScript graphics (
graphx.doc
)
internal coordinate manipulation and analysis (
intcor.doc
)
energy minimization (
minimiz.doc
)
miscellaneous [but very useful] commands (
miscom.doc
)
nonbond options (
nbonds.doc
)
atom selection (
select.doc
)
Full List
of Documentation (in alphabetic order)
abpo.doc
ace.doc
adumb.doc
afm.doc
analys.doc
apbs.doc
aspenr.doc
aspenrmb.doc
axd.doc
block.doc
cadpac.doc
cca.doc
cff.doc
cfti.doc
changelog.doc
charmm.doc
charmmrate.doc
cheq.doc
cmake.doc
commands.doc
cons.doc
consph.doc
corman.doc
correl.doc
corsol.doc
cross.doc
crystl.doc
csa.doc
dcor.doc
denbias.doc
developer.doc
diesel.doc
dimens.doc
dims.doc
domdec.doc
drude.doc
dynamc.doc
eds.doc
eef1.doc
emap.doc
energy.doc
ensemble.doc
epmf.doc
ewald.doc
facts.doc
fitcharge.doc
fitparam.doc
flucq.doc
fmm.doc
fourd.doc
fren.doc
g09.doc
galgor.doc
gamess.doc
gamess-uk.doc
gamus.doc
gbim.doc
gbmv.doc
gbsw.doc
genborn.doc
gnn.doc
gopair.doc
gpu.doc
graphx.doc
grid.doc
hbonds.doc
hbuild.doc
hqbm.doc
images.doc
install.doc
intcor.doc
io.doc
larmord.doc
lonepair.doc
lupopt.doc
mc.doc
mcma.doc
minimiz.doc
miscom.doc
mmff.doc
mmff_params.doc
mmfp.doc
mmpt.doc
mndo97.doc
molvib.doc
monitor.doc
mrmd.doc
mscale.doc
ms-evb.doc
mtp.doc
mtpl.doc
mts.doc
nbonds.doc
nmr.doc
nose.doc
nwchem.doc
openmm.doc
overlap.doc
parallel.doc
parmfile.doc
pbeq.doc
pdetail.doc
pert.doc
perturb.doc
phmd.doc
pimplem.doc
pipf.doc
pnm.doc
preflx_list.doc
prefx.doc
pressure.doc
primo.doc
proto.doc
qchem.doc
qmmm.doc
qturbo.doc
qub.doc
random.doc
rdc.doc
rdfsol.doc
repdstr.doc
replica.doc
rism.doc
rtop.doc
rush.doc
rxncons.doc
sasa.doc
sbound.doc
scalar.doc
sccdftb.doc
scpism.doc
select.doc
sgld.doc
shapes.doc
shell.doc
ssnmr.doc
stringm.doc
struct.doc
subst.doc
support.doc
tamd.doc
testcase.doc
test.doc
tmd.doc
torque.doc
tpcntrl.doc
tps.doc
trek.doc
umbrel.doc
usage.doc
valbond.doc
vibran.doc
zerom.doc
NIH Helix/Biowulf Systems
charmm.org Homepage
CHARMM Documentation Index /
Rick_Venable@nih.gov